DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-c and cv-c

DIOPT Version :10

Sequence 1:NP_001097786.1 Gene:cv-c / 41749 FlyBaseID:FBgn0285955 Length:2351 Species:Drosophila melanogaster
Sequence 2:XP_061504497.1 Gene:cv-c / 1270384 VectorBaseID:AGAMI1_004777 Length:1709 Species:Anopheles gambiae


Alignment Length:2145 Identity:712/2145 - (33%)
Similarity:955/2145 - (44%) Gaps:679/2145 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 SAISNSSSSSSNQLQQQQHQTLINGQAATVPA-----------ATAAATGGVAAATSGRTSAIAA 491
            |:.|||:|:|||......:...:...|:|..|           ..|...|.||....||..|...
Mosquito    13 SSTSNSTSNSSNGGDVANNNNHLPKDASTSRADIVVCRTKMRDQGAVGNGHVATVADGRGGAKQG 77

  Fly   492 DTTRYKSGLSDVAANGDVDGRPTSSATTSVVATGAPSVFSTGCATMPRT-------RQYGSNVAA 549
            .:..:......:.....::.:.....|    ||..||    ..|..|.|       |..||:..|
Mosquito    78 GSMCHPEQSRTIHPRAQMESQSQGDRT----ATAHPS----SSAASPSTIDSCDPARYKGSSQPA 134

  Fly   550 ALATGATLATSATSATSSATGATSPGSHTMTADKKFLSQAAPVQGHHHHKLQFADKADSELAALD 614
            |.:| |....|::......|.:.|||:.|.|.       .:.||                     
Mosquito   135 AAST-ARHHRSSSLGDRDMTDSASPGASTTTV-------GSTVQ--------------------- 170

  Fly   615 NLDLAHSLDLLDVDGEDPYGALQDYLERVKREINEVFELRKVQRLEQQLREQLEERLSQAGVQQL 679
                         ..||||..|:..||:|:.||:|:||            :.|.|..:...|...
Mosquito   171 -------------KPEDPYAELERILEKVQAEISEMFE------------QTLLEGNAAPAVASS 210

  Fly   680 DELSRSTESDSGFDSSSTTATSGTPATATAAGAGAVTSGKPVTTKLRALPPPPLSPTKTTTNSMP 744
            ::..|.|.||                                               |...|.: 
Mosquito   211 NDTVRGTGSD-----------------------------------------------KKRKNDL- 227

  Fly   745 TPPVQADDVNIWACKFLRDLDSLMAAGDKLPPHLAALAEGSGSGSASSSPTSRTAPILLSAAASA 809
                          |..||                   |.:|.|                     
Mosquito   228 --------------KANRD-------------------EATGYG--------------------- 238

  Fly   810 AIQSRLGKGSSSIMEHQLQQQQ-QQQNGLVLKPEKHATIPLQSFYLDCGRNEASPATKSNVAYMR 873
                ||.|....:.:|...||| .|||  .....|:||||           .|:...:||     
Mosquito   239 ----RLVKAGPHLQQHHHHQQQPHQQN--ASHHVKYATIP-----------HANVTQQSN----- 281

  Fly   874 TLSAPNGGFASGGGGGAARGSGAPALPPQSQRKSLACPPLNGQADTITPTPATHKLTNFQSALKI 938
              ||..|..:.|                                                   :.
Mosquito   282 --SASAGAISYG---------------------------------------------------RT 293

  Fly   939 EEMAAAKGTAMATGESQLATTIEDLKSRRQRQLSGGDMETMLASQPMSMPKRVGINHAVLTSRNA 1003
            .:..|..|.|..|..:|      |.:.|...::......|.:.:...::||              
Mosquito   294 NQSLAIDGYAKRTRNAQ------DPRYRSHDRMEMVSSSTTVPAAASTLPK-------------- 338

  Fly  1004 ITPPPASASSASQSAASVHSAKGSSSAGTTPGYLVDVTKKGSTSTIWTSEESILRSVGAVDEDNN 1068
                   .|..||||....|:.|.||.|.       .|::..:    .|::..|..|||      
Mosquito   339 -------PSVRSQSAGENMSSSGYSSYGR-------YTERSDS----LSDDMSLLDVGA------ 379

  Fly  1069 STSSSSACEEATGVLSSGKSGISLDSSGLDNDNNESGIGTATPPKDMSHYWKSHHLQHHHHHHHR 1133
                 .:|::            ||:.:|.|..::|                              
Mosquito   380 -----PSCDD------------SLEGAGDDTTSDE------------------------------ 397

  Fly  1134 KCTGSAQDNESVSSLEALRKMKFQKSGSVASSDDPDVLEVLSQCGSGGEANESQDDMLDEEKDKM 1198
                    .|::.| ..:||...||        ||   .|.:|.|:|.                :
Mosquito   398 --------RETIVS-GGVRKRIQQK--------DP---SVQAQRGAGA----------------I 426

  Fly  1199 SKSQDYDEIWDCDCTDGDASSASGGGGVTATPVILRRKYTAPPPILVPRTQRSHSLDHYHSPQPL 1263
            :.|:|:...: |:..: ....|:..|..|:|..:             |.....|           
Mosquito   427 APSKDFGGYY-CNSIE-QQLGANDRGLKTSTNSL-------------PSVAGGH----------- 465

  Fly  1264 VHPRKVLPIH-----HHALKSKERGQLSLVLRQEPFQSLLSPSATAANQLHHFVELPSPSSASLH 1323
                :.|.:|     |.:....:|.|..|.|.|||||.|.|          :..:||||||.|||
Mosquito   466 ----RNLALHLKFKSHQSAIDAKRKQFFLTLDQEPFQPLKS----------NMADLPSPSSTSLH 516

  Fly  1324 SGLGDSGGIQELCTKSNSAPMLLKEREMSRRFDNFEAQHLTLRYSRSQSDRYLAEIEAVEACKWL 1388
            ||...... :||.:||:|||:|||:.|     :........||||||||||:||||||:|||:||
Mosquito   517 SGHNHLIA-EELGSKSSSAPVLLKDEE-----NVLTVARANLRYSRSQSDRHLAEIEAIEACRWL 575

  Fly  1389 RAAGFPQYAQMYEDHQFPIDLNNVAKDHTNLENDQLQSLYRRLCVLNRCATMRLD-QSHKPQTPQ 1452
            |||||||||||||||||||.:.:|||||..||.|.||||:|||..|||||.|.|| ..|.|: |.
Mosquito   576 RAAGFPQYAQMYEDHQFPIIVEDVAKDHPFLEPDPLQSLFRRLHTLNRCANMHLDAHQHTPK-PS 639

  Fly  1453 QKEESDDENFALSEHWTFQPHIRRWSRIGEMGLELPPPGLLSL--NVEKTESSSKESSPD----- 1510
            |:::|||::.||||.||||.:.|||||:.:      ..||:|:  |.::.:...:.|..|     
Mosquito   640 QRDDSDDDSCALSEAWTFQHNSRRWSRVDD------AIGLVSVINNKQQQQQQQRNSHKDGKGSG 698

  Fly  1511 -------------------RFE-------EDGAGITLVTPGCSKAGGIPNDGSSLGEGSDSG--- 1546
                               |.|       |.|..||:         |:|:|..|..:...:|   
Mosquito   699 SDHAAGSQRRHHNNNNTLLRAEDHEKLWLESGGKITI---------GVPSDTDSQDDCGTNGSGV 754

  Fly  1547 RLRRSGSERIKDQAKALLRRVESIKSRRRKRQNRENVVISGPTVLDLSQFGQRSSLRKP------ 1605
            .|||:||||:||.|||:|||||||||||||:|||:.::|..|.....|  ...|...:|      
Mosquito   755 HLRRTGSERLKDGAKAILRRVESIKSRRRKKQNRDGLIILAPPAAHSS--AHLSPHHRPAGGDGT 817

  Fly  1606 --------DAV-YSTPPSPSALSPMHTFPKA---------PFFGNDLKVPSHSDNFLSPNRSSP- 1651
                    |.: ||.|.||...:.:..|..|         ..|||||.  ...:..||||.|:| 
Mosquito   818 DGYGGSGFDIMSYSNPTSPRPSAELLAFDDALDAAGNRRKDLFGNDLL--GRRNLLLSPNVSTPA 880

  Fly  1652 -----------KRTPTTPRSMRTSPLHFFSSPMSQLKEGKSDDSSSYYSDSQESSTGG------- 1698
                       ||  .|.||.....|.|......|.:....|||||..|:......||       
Mosquito   881 PAWSPLHGADGKR--YTDRSSPGGTLPFRQQVQLQQESRSGDDSSSICSEDSGGGGGGPDLNLQT 943

  Fly  1699 ----KLSLRKPSKARRFLQRTGKV------DD---IGAHSDSECH-QGRKLLIK----------- 1738
                |::.||..:|::.|:  .||      ||   .||.|||||| :.|:..||           
Mosquito   944 GRSDKMASRKYPRAKKALR--SKVISSTVADDQSGSGALSDSECHAKQRRSKIKIELDCDLPGMN 1006

  Fly  1739 DANSNTT------------------EVKVKKLTRGGSLNLGKDPKK-RDGFRSSSFRSRSTSRKE 1784
            |..|.||                  :....||.|||||||||..|: ||.|.:.|.|..|     
Mosquito  1007 DGVSTTTGDGKGAGRGVGNNTLTAPDAAPSKLHRGGSLNLGKASKRYRDAFSNRSVRHSS----- 1066

  Fly  1785 AKNDEDTAGATTNGGSKRQPVVRWHSFQM-----------------------EERPNMIFR---- 1822
             |..:|  |......|||..|.||||||.                       ::|.:.:.|    
Mosquito  1067 -KTADD--GGEGRSSSKRSTVARWHSFQQPKVSPIDLQQQQQQQQSDQLGSKDDRKHALQRGTTI 1128

  Fly  1823 -----------------KC-------------------------------------FSKKIEPLQ 1833
                             .|                                     ..:.::...
Mosquito  1129 AQLVSSTTNSSNAMTVTSCGAITTTVSTIVTSTTGKAHTLLGLTVEGTQGGSIGAAIGRGLDGSA 1193

  Fly  1834 EDAGGMPFAAMSAGQLQIIRKLALVTLTGHMERYCPSHRSGWNWELPKFIKKIKMPDYKDKKVFG 1898
            ....|:..:.||.|||.::|||.|..|||:||||||:|||||||:||||||:||.|||||:||||
Mosquito  1194 TSGAGLRMSEMSCGQLLVVRKLGLANLTGYMERYCPTHRSGWNWDLPKFIKRIKTPDYKDRKVFG 1258

  Fly  1899 VPLLMILQRSGQTLPLAVRAAFRWLQLNALDQVGIFRKSGGKSRIMKLREQIEVTDSTAECMDVF 1963
            :||::.||:.|.|:|..:|.||.||:.|||||||:|||.|.||||.||:..||.::......::|
Mosquito  1259 MPLVLNLQKYGSTVPHTIRLAFGWLEKNALDQVGLFRKPGVKSRIAKLKSVIEASNDVGWRSEMF 1323

  Fly  1964 DLQQAYDVADMLKQYFRELPESLLTTKMSETFVAIFQHLPAEVRLDAVQCAVLLLPDENREILYV 2028
            |...||||||::||||||||:.|||.|:||||:||||:||.|||.:|||.|:||||||:||:|::
Mosquito  1324 DEYHAYDVADLVKQYFRELPDPLLTAKLSETFIAIFQYLPNEVRAEAVQSAILLLPDEHREVLHL 1388

  Fly  2029 LLEFLTIVAANSQQNQMTSNNLGVCLAQSIFHSSISTGSASVSASPRRK--GKGSGMPDMKELAE 2091
            ||.||..|..||..||||:|||.||.|.|:|:  :.:|:...:||||||  |.|||.||.|||:|
Mosquito  1389 LLTFLEKVVQNSSLNQMTANNLSVCFAPSLFY--LLSGNRYTAASPRRKKTGAGSGTPDEKELSE 1451

  Fly  2092 AKASHECLSFMIEHYKQIYTAAKEKLSKCNFSYMEESKPLPLEALGEGMQFHNWRGYLYECTSAT 2156
            ||||||||::|:||::.::|.:.:::.:|||:||:||||:||.:||..|...||||||.|..:..
Mosquito  1452 AKASHECLAYMVEHFQTLWTISSDQMRRCNFNYMDESKPVPLASLGTEMHVQNWRGYLSESINEC 1516

  Fly  2157 IKEGREKTRGWFSINSLNDSSVDIAYKKVGDGHPLRLWRCSTEIEGPPKEVLEFVIKQRASWDTN 2221
            ::||||:.|||.|::| :|.||...:||||||||||||:|.||:|.||.||::.::.:|..||..
Mosquito  1517 LREGRERPRGWVSLSS-SDPSVTAFFKKVGDGHPLRLWKCVTEVEAPPMEVIQHIVNERPLWDAY 1580

  Fly  2222 LLQCQTVKKLDDRTEIYQYALDGQLTTDFCVLRSWQTDLPRGACVIVETSIDHAKAKPLFGAVRG 2286
            ||:.:|:::||..|:::|||. ||..|::||:|.|:.|||||||||||.||.|..|..|.|.|.|
Mosquito  1581 LLKWRTIEQLDQDTDVFQYAC-GQPVTEYCVVRQWKNDLPRGACVIVEVSISHENATTLLGGVNG 1644

  Fly  2287 VVLASRYLIEPCGSGRSRVMHLARVDVKGKTPEWYNKNYGHICSHYLSRIRLAFKHVADGPESKV 2351
            |||||||||||||||:.::|||:|||:||:||:||||||||||..|||:|:..|:|..:|||:||
Mosquito  1645 VVLASRYLIEPCGSGKCKLMHLSRVDMKGRTPDWYNKNYGHICQQYLSKIKKFFEHCTEGPETKV 1709

  Fly  2352  2351
            Mosquito  1710  1709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-cNP_001097786.1 SAM_DLC1,2-like 1382..1441 CDD:188937 44/58 (76%)
RhoGAP_DLC1 1893..2116 CDD:239840 130/224 (58%)
SRPBCC 2148..2343 CDD:472699 113/194 (58%)
cv-cXP_061504497.1 None

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