DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and NANOG

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_079141.2 Gene:NANOG / 79923 HGNCID:20857 Length:305 Species:Homo sapiens


Alignment Length:243 Identity:66/243 - (27%)
Similarity:106/243 - (43%) Gaps:47/243 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 PATKQSQILGKSATKKESSGKPAAKKKKLS------STVALP--PDISPTGSS-DSLMRDKLMAN 355
            ||..||....:::..||||..|.....:.:      |:..:|  ..:||..|| |.|::|.  .:
Human     5 PACPQSLPCFEASDCKESSPMPVICGPEENYPSLQMSSAEMPHTETVSPLPSSMDLLIQDS--PD 67

  Fly   356 NSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSA 420
            :|:||    ..:..::|..::...||....      :|:|.||.|:..|:..|...|:.:||||.
Human    68 SSTSP----KGKQPTSAEKSVAKKEDKVPV------KKQKTRTVFSSTQLCVLNDRFQRQKYLSL 122

  Fly   421 SERTEMAKLLMVTETQVKIWFQNRRTK---WKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGE 482
            .:..|::.:|.::..|||.||||:|.|   |:|.:...|:.....|:|         |.|.|| .
Human   123 QQMQELSNILNLSYKQVKTWFQNQRMKSKRWQKNNWPKNSNGVTQKAS---------APTYPS-L 177

  Fly   483 PTDKRSSNATSPTVGNAATIAEIKKSPKSPNRGSNNNNNNTLNNNVNN 530
            .:........:|| ||.            |...:...||:|.:|...|
Human   178 YSSYHQGCLVNPT-GNL------------PMWSNQTWNNSTWSNQTQN 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 23/58 (40%)
NANOGNP_079141.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..96 24/102 (24%)
COG5576 74..191 CDD:227863 37/133 (28%)
Homeodomain 97..152 CDD:459649 22/54 (41%)
Required for DNA-binding. /evidence=ECO:0000269|PubMed:25825768 122..151 11/28 (39%)
8 X repeats starting with a Trp in each unit 196..240 5/17 (29%)
Sufficient for transactivation activity. /evidence=ECO:0000250 196..240 5/17 (29%)
Sufficient for strong transactivation activity. /evidence=ECO:0000250 241..305
Blue background indicates that the domain is not in the aligned region.

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