DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NK7.1 and Barx2

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001414382.1 Gene:Barx2 / 679701 RGDID:1584840 Length:290 Species:Rattus norvegicus


Alignment Length:265 Identity:62/265 - (23%)
Similarity:113/265 - (42%) Gaps:47/265 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 SGKPAAKKKKLSSTVALPPDI----SPTGSSDSLM--RDKLMAN-NSSSPGSNVNAQMQSNANST 375
            :|.|:.:...|.|.:...|.:    .|||...:.:  |..:.|. .:::..:...|..::.....
  Rat    62 TGSPSLRAYPLLSVITRQPTVISHLVPTGPGLTPVNTRHAVAAEAAAAAAAAAAAAAAETPGGEA 126

  Fly   376 LETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIW 440
            |.::|.:::..:...::.:::||.||..|:..|||.|:.:||||..:|.::|:.|.:|:.|||.|
  Rat   127 LASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTW 191

  Fly   441 FQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPTDKRSSNATSPTVGNAATIAEI 505
            :||||.||||.......|                |.|.|.|.|  |::|..||         .||
  Rat   192 YQNRRMKWKKMVLKGGQE----------------APTKPKGRP--KKNSIPTS---------EEI 229

  Fly   506 KKSPKSPNRGSNNNNNNTLNNNVNNSEGKVPAKQSTTKIKKQLNALLEKTVKTANQAHRSAELES 570
            :...|..::..:.....:|.   ...|.:.|.:.....:          .::.|..:.:..||..
  Rat   230 EAEEKMNSQAQSQEQLGSLQ---GQEEPRDPQEPKACLV----------PLEVAEPSQQPQELPE 281

  Fly   571 SDQKP 575
            :..:|
  Rat   282 ASSEP 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 27/55 (49%)
Barx2NP_001414382.1 None

Return to query results.
Submit another query.