DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Nkx6-1

DIOPT Version :9

Sequence 1:NP_001247103.1 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_113925.1 Gene:Nkx6-1 / 65193 RGDID:69318 Length:365 Species:Rattus norvegicus


Alignment Length:449 Identity:127/449 - (28%)
Similarity:173/449 - (38%) Gaps:106/449 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 MLRV--RDNNNMASTISDSPPTTFLQKQLEAVVAPRPSSVHPQHQQPQQQTVQLQQQRRSVSTPA 167
            ||.|  .:....::.:..|||...|....|......|::..|....|..          |.|:.:
  Rat     1 MLAVGAMEGPRQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPTGPPS----------SSSSSS 55

  Fly   168 ITTTPGPPTNWH---------AHVYDRL--PPH----PTPHSIADILGMSFVKKERPE--VAFDA 215
            .:::|.||...|         |.....|  ||.    .|||.|.|||       .||.  ||..|
  Rat    56 SSSSPSPPLGAHNPGGLKPPAAGGLSSLGSPPQQLSAATPHGINDIL-------SRPSMPVASGA 113

  Fly   216 QGPAKSPNSILKPYQEQQPIRSSSISMSDASEEESAAVAGATSAATAAAAVAATITAATVATPLD 280
            ..|:.||:.            |||.|.|.||         ||||:.||||.||...||.     .
  Rat   114 ALPSASPSG------------SSSSSSSSAS---------ATSASAAAAAAAAAAAAAA-----S 152

  Fly   281 QPLNLCVVKKSRDSNNSPMPATKQSQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSD 345
            .|..| :....|.|:.|| |..........||....:.|:   ..|.|:......|...|     
  Rat   153 SPAGL-LAGLPRFSSLSP-PPPPPGLYFSPSAAAVAAVGR---YPKPLAELPGRTPIFWP----- 207

  Fly   346 SLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEK 410
            .:|:        |.|..:.......:..|.|.    |.|.      ::|..|.||:|:|||.|||
  Rat   208 GVMQ--------SPPWRDARLACTPHQGSILL----DKDG------KRKHTRPTFSGQQIFALEK 254

  Fly   411 MFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGA-TGT 474
            .||..|||:..||..:|..|.:||:|||:|||||||||:|:      .|||..::..|..: |..
  Rat   255 TFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK------HAAEMATAKKKQDSETER 313

  Fly   475 ATTTPSGEPTDKRSSNATSPTVGNAATIAEIKKSPKSPNRGSNNNNNNTLNNNVNNSEG 533
            ...|...|..|...:....|. .:...|.::.|..||        :..:|..:.:.:||
  Rat   314 LKGTSENEEDDDDYNKPLDPN-SDDEKITQLLKKHKS--------SGGSLLLHASEAEG 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_001247103.1 Homeobox 397..449 CDD:278475 32/51 (63%)
Nkx6-1NP_113925.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..136 37/138 (27%)
Repressor domain. /evidence=ECO:0000250 102..269 67/227 (30%)
Homeobox 240..294 CDD:395001 33/53 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..365 16/84 (19%)
Involved in DNA-binding. /evidence=ECO:0000250 307..365 12/66 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336909
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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