DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and hoxa9b

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_571608.1 Gene:hoxa9b / 58048 ZFINID:ZDB-GENE-000823-2 Length:258 Species:Danio rerio


Alignment Length:217 Identity:58/217 - (26%)
Similarity:84/217 - (38%) Gaps:53/217 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 VVKKSRD------SNNSPMPATKQSQILGKSATKKESSGKPAA-------------------KKK 326
            |.::||:      |...|.....:|.|.|.|.:..:.:|...|                   :..
Zfish    33 VQQQSRELTLLEYSEQEPYTFQAKSSIFGASWSPVQPTGASIAYHPYIHHPCSTGDSDGASVRPW 97

  Fly   327 KLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDS-DSGSTD- 389
            .|....|||.....|.:...:..:.|:.:...:..:.:.|:..:|...|.....||: .:||.| 
Zfish    98 ALEPLPALPFTGLSTDTHQDIKLEPLVGSGECTTHTLLVAETDNNTTQTERKVPDDAVSNGSHDE 162

  Fly   390 --------------------------ARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAK 428
                                      |:..:|.|..:|..|..||||.|....|||...|.|:|:
Zfish   163 KIPAETKLDLDPSKCNQDNPLSNWLHAKSTRKKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVAR 227

  Fly   429 LLMVTETQVKIWFQNRRTKWKK 450
            ||.:||.||||||||||.|.||
Zfish   228 LLNLTERQVKIWFQNRRMKMKK 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 30/55 (55%)
hoxa9bNP_571608.1 Hox9_act 1..174 CDD:461369 25/140 (18%)
Homeodomain 193..249 CDD:459649 30/55 (55%)

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