DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and msx2a

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001025440.1 Gene:msx2a / 573620 ZFINID:ZDB-GENE-980526-322 Length:257 Species:Danio rerio


Alignment Length:171 Identity:60/171 - (35%)
Similarity:79/171 - (46%) Gaps:49/171 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 AAKKKKLSS-------------TVALPPDISPTGSSDSLMRDKLMANNSSSPGS-----NVNAQM 368
            |..|.|:||             |.:||      .|.|:||..| ..:.|:|.||     .:|...
Zfish    16 ANHKSKVSSDEDDDDHGSRSVRTQSLP------FSVDALMSTK-ERSESTSRGSIHMTRIINQDD 73

  Fly   369 QSNANSTLETT-------EDDS----DSGSTDAR---------RK----KKARTTFTGRQIFELE 409
            :|..:.:::.|       ||.|    ...||..|         ||    :|.||.||..|:..||
Zfish    74 RSIYSDSVDFTKRCESAKEDSSWINKPRLSTSPRSQSPTICPLRKHKTNRKPRTPFTTAQLLALE 138

  Fly   410 KMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKK 450
            :.|..|:|||.:||.|.:..|.:|||||||||||||.|.|:
Zfish   139 RKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 31/55 (56%)
msx2aNP_001025440.1 Homeodomain 123..179 CDD:459649 31/55 (56%)

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