DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and lbx1a

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001020703.1 Gene:lbx1a / 564103 ZFINID:ZDB-GENE-040724-40 Length:269 Species:Danio rerio


Alignment Length:298 Identity:78/298 - (26%)
Similarity:123/298 - (41%) Gaps:91/298 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 TPLDQ---PLNLCVVKKSRDSNNSPM-----------PATKQS-QILG-----KSATKKESSGKP 321
            :|||.   |.|          :|.|:           |:.|:| .|.|     .|..|..|:|.|
Zfish    18 SPLDHLPPPAN----------SNKPLTPFSIEDILNKPSVKRSYTICGTAHLLSSGEKHPSTGHP 72

  Fly   322 AAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSG 386
            .:.:..|:.|       ||..:.:.|.       :.:..|..|         |.|:..|  ...|
Zfish    73 LSNRALLTQT-------SPLCALEELA-------SKTFKGLEV---------SVLQAAE--GRDG 112

  Fly   387 ST------DARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRR 445
            .|      ..::::|:||.||..||:||||.|..:||||.::|.::|:.|.:|..||..||||||
Zfish   113 MTLFGQRNTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRR 177

  Fly   446 TKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPTDKRSSNA-----TSPTVGNAATIAEI 505
            .|.|:       :..|.|:......|.|..       |.:|.:..|     .:.|:|:::.:   
Zfish   178 AKLKR-------DLEEMKADVESAKAVGNV-------PFEKMAKLADLEKRVNGTLGDSSAV--- 225

  Fly   506 KKSPKSPNRGSNNNNNNTLNNNVNNSEGKVPAKQSTTK 543
                 ||:| ||:.:..|  |.::.|........:|:|
Zfish   226 -----SPSR-SNHEHEGT--NKLHMSPSSPYTDHTTSK 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 29/55 (53%)
lbx1aNP_001020703.1 Homeodomain 126..182 CDD:459649 29/55 (53%)

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