DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and nkx6.3

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001159612.1 Gene:nkx6.3 / 558978 ZFINID:ZDB-GENE-070810-7 Length:272 Species:Danio rerio


Alignment Length:198 Identity:64/198 - (32%)
Similarity:89/198 - (44%) Gaps:40/198 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 SQILGKS-----ATKKESSGKPAAKKKKLSSTVALP-----PDISPTGSS---DSLMRDKLMANN 356
            |.||.:|     .|....||.|:  .....:||..|     .|.:|:|.|   ..::....|...
Zfish    56 SDILSRSMVSGPGTPALLSGYPS--MGGFGTTVPSPGVYYNRDYTPSGLSTFPKPVVECAGMKGK 118

  Fly   357 SSS----PGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKY 417
            |||    .|.......|...|:.....|        :..:||..|.||:|.|||.|||.||..||
Zfish   119 SSSCWVDGGYEWRGARQQCGNNMGHNPE--------NVGKKKHTRPTFSGHQIFALEKTFEQTKY 175

  Fly   418 LSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGE 482
            |:..||..:|..|.:||:|||:|||||||||:|:             |..:|.:|.|:....:|:
Zfish   176 LAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK-------------SATEPSSTQTSRGESAGD 227

  Fly   483 PTD 485
            .::
Zfish   228 GSE 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 34/55 (62%)
nkx6.3NP_001159612.1 Homeodomain 150..208 CDD:459649 35/57 (61%)

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