DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and nkx3-1

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001373254.1 Gene:nkx3-1 / 555375 ZFINID:ZDB-GENE-081104-238 Length:185 Species:Danio rerio


Alignment Length:204 Identity:64/204 - (31%)
Similarity:90/204 - (44%) Gaps:47/204 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 AAKKKKLSS-----TVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQS------NANST 375
            |...|:|:|     .::|..|          .:|:...|..|....:.:.|..|      :...|
Zfish     2 ATSNKQLTSFFIEDILSLKED----------KKDEDSCNAESDRDDSTDRQTDSADTCRTSEGKT 56

  Fly   376 LETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIW 440
            :.:||.....|     :||::|..||..|:.||||.|..::||||.|||.:|..|.:||||||||
Zfish    57 VSSTEMTGGGG-----KKKRSRAAFTHLQVLELEKKFSRQRYLSAPERTHLASALHLTETQVKIW 116

  Fly   441 FQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPTDKRSSNATSPTVGNAATIAEI 505
            |||||.|.|::...|.:.....:.|||...|                   ||......|:.:|.:
Zfish   117 FQNRRYKTKRRQLTTEHSKDYFQKSNAAAMA-------------------ATEEDFFRASLLATV 162

  Fly   506 KKSPKSPNR 514
            .||  ||.|
Zfish   163 YKS--SPYR 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 33/55 (60%)
nkx3-1NP_001373254.1 COG5576 15..>136 CDD:227863 47/135 (35%)
Homeodomain 70..126 CDD:459649 33/55 (60%)

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