DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and nkx6-1

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001016583.2 Gene:nkx6-1 / 549337 XenbaseID:XB-GENE-483574 Length:342 Species:Xenopus tropicalis


Alignment Length:440 Identity:103/440 - (23%)
Similarity:160/440 - (36%) Gaps:126/440 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 DNNNMASTISDSPPTTFLQKQLEAVVAPRPSSVHPQHQQPQQQTVQLQQQRRSVSTPAITTTPGP 174
            :....::.:..|||...|....| :.||    ::|.:..| .|.........|.|:.:::::|.|
 Frog     2 EGTRQSAFLLSSPPLAALHSMAE-MKAP----LYPAYTLP-VQACSSSTSSSSSSSSSLSSSPSP 60

  Fly   175 P---TNWHAHVYDRLPPH---------------PTPHSIADILGMSFVKKERPEVAFDAQGPAKS 221
            |   .....|.:...||.               .|||.|.|||                      
 Frog    61 PLGSPTQLTHKHSSSPPSSGGLSLGTPPLQISAATPHGINDIL---------------------- 103

  Fly   222 PNSILKPYQEQQPIRS--SSISMSDASEEESAAVAGATSAATAAAAVAATITAATVATPLDQPLN 284
                      .:||.|  .|::::.:|...|||||.::|.|...|.:                  
 Frog   104 ----------SRPIVSCLPSLALTTSSSASSAAVASSSSPAGILAGL------------------ 140

  Fly   285 LCVVKKSRDSNNSPMPATKQSQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMR 349
                  .|.|:.||.|..........||..     ..|...|.|:......|...|     .:|:
 Frog   141 ------PRFSSLSPPPPPPPGLYFSPSAAM-----AVARYPKPLTDLPGRTPIFWP-----GVMQ 189

  Fly   350 DKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFEN 414
                    |.|..:.......:..|.|.    |.|.      ::|..|.||:|:|||.|||.||.
 Frog   190 --------SPPWRDARLACGPHQGSVLL----DKDG------KRKHTRPTFSGQQIFALEKTFEQ 236

  Fly   415 KKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQ---DNVTNNEAAEHKSSNAKPGATGTAT 476
            .|||:..||..:|..|.:||:|||:|||||||||:|:   :..|..:..:.::...|..:.....
 Frog   237 TKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDTETERLKGASDNEEE 301

  Fly   477 TTPSGEPTDKRSSNATSPTVGNAATIAEIKKSPKSPN----RGSNNNNNN 522
            .....:|.|..|.:         ..|.::.|..||.:    :.|.|::::
 Frog   302 DDDYNKPLDPNSDD---------EKITQLLKKHKSSSAILLQQSENDSSS 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 34/55 (62%)
nkx6-1NP_001016583.2 Homeodomain 214..272 CDD:459649 34/57 (60%)

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