DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and hoxb3

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001015971.1 Gene:hoxb3 / 548725 XenbaseID:XB-GENE-482576 Length:386 Species:Xenopus tropicalis


Alignment Length:419 Identity:102/419 - (24%)
Similarity:161/419 - (38%) Gaps:112/419 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 PYQ--------EQQPIRSSSISMSDASEEESAAV--AGATSAATAAAAVAATITAATVATPLDQP 282
            |||        .||...:|| .|.:..:..|.::  .|.:.....|..:..:.....:::...||
 Frog    17 PYQAGSLGYEGPQQSFPTSS-HMDNEFQRSSCSLQSLGHSGPLVKAKNLNGSCMRPNLSSEQSQP 80

  Fly   283 LNLCVVKKSRDSNNSPMPATKQSQILGKSATKKESSGKPAAKK--------KKLSSTVALPPDIS 339
            |: .....|.::|:|    :.|:.:...|..|.::||.||:|:        ::.|...:.||  :
 Frog    81 LS-PTANPSSNTNSS----SSQASLSKPSPAKSQASGSPASKQIFPWMKESRQNSKQKSSPP--A 138

  Fly   340 PTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQ 404
            |...|        ...:.|.|||:.:                            |:|||.:|..|
 Frog   139 PAAES--------CGGDRSPPGSSAS----------------------------KRARTAYTSAQ 167

  Fly   405 IFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKP 469
            :.||||.|...:||....|.|||.||.::|.|:||||||||.|:||...|   :.....|..|.|
 Frog   168 LVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKV---KGMSSSSGGASP 229

  Fly   470 GATGTATTTPSGEPTDKRSSNATSPTVGNAATIAEIKKSPKSPNRGSNNNNNNTLNNNVNNSEGK 534
                  |:||   |...:||   :..:|:..::....::|..|  ..|.::.|....|    .||
 Frog   230 ------TSTP---PLSMQSS---AGFLGSMHSMTANYEAPSPP--PFNKSHQNAYYQN----PGK 276

  Fly   535 -VPAKQSTTKIKKQLNALLE---KTVKTANQAHRSAELESS---------DQKPA---------- 576
             .|::|      |..|...|   ..::....|:.|..::.|         |..||          
 Frog   277 GCPSQQ------KYGNTAAEYDHHGLQGNGGAYVSPNMQGSPVYVGGNYVDSVPAQGPPLYGLNH 335

  Fly   577 VEKRPNNSNENQLLHQRLHQHAIPLTVEP 605
            :..:|.|.:.|........||..|....|
 Frog   336 LAHQPTNMDYNGAPPMPASQHHAPCDPHP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 30/55 (55%)
hoxb3NP_001015971.1 Homeodomain 157..213 CDD:459649 30/55 (55%)
DUF4074 325..384 CDD:463833 8/40 (20%)

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