DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Dbx2

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001418946.1 Gene:Dbx2 / 541457 RGDID:1359605 Length:377 Species:Rattus norvegicus


Alignment Length:417 Identity:100/417 - (23%)
Similarity:157/417 - (37%) Gaps:121/417 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 LQKQLEAVVAPRPSSVHPQHQQPQQQTVQLQQQR-RSVSTPAITTTPGPPTNWHAHVYDRLPPHP 190
            |.:..:|:.:|.|:..  ..:.|:.::.:|..|| |::...|:....|  ..|.......|    
  Rat    29 LLRAKDALRSPDPAGA--LSRSPRTRSPRLPGQRARTMLPSAVAAQAG--AYWDVVASSAL---- 85

  Fly   191 TPHSIADILGMSFVKKERPEVAFDAQGPAKSPNSILKPYQEQQPIRSSSISMSDASEEESAAVAG 255
                    ||:                ||....|:.|.:..:..:|               |.||
  Rat    86 --------LGL----------------PAPGFGSLGKSFLIENLLR---------------AGAG 111

  Fly   256 ATSAATA---AAAVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMPATKQSQI-LGKSATKKE 316
            .|.|..:   ||........:..|.|:  ||.||..        .|..|....|: .|::..:::
  Rat   112 PTHAPPSPRPAAGPECPQLRSLPANPV--PLKLCPA--------GPFGARWAFQMPPGRAPGERD 166

  Fly   317 SSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSP------GSNVNAQMQSNANST 375
            |:.:|:|                |..|...|:        |:.|      |.:........|.|.
  Rat   167 SAFQPSA----------------PVPSKPFLL--------SAGPFYSACCGGSCRRPASPTAFSR 207

  Fly   376 LE-----TTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTET 435
            .|     .|:|    .::.|||....|..|:..|...|||||:.:||:|.::|.::|..|.:.|:
  Rat   208 EEHGLPLLTQD----SNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRRKLAISLGLKES 268

  Fly   436 QVKIWFQNRRTKWK--KQDNVTNNEAAEHKSSN----AKPGATGTATTTPS-GEPTDKRSSNATS 493
            ||||||||||.||:  |:..|.:|...:..|..    |:| |.|.....|| .|.:...||.:..
  Rat   269 QVKIWFQNRRMKWRNSKEKEVLSNRCLQEVSLQEDRLAQP-AAGCPPQCPSVWEVSQPHSSPSWR 332

  Fly   494 PTVGNAATIAEIKKSPKSPNRGSNNNN 520
                        ::||:|..|.|..|:
  Rat   333 ------------EESPESVERLSQENS 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 27/57 (47%)
Dbx2NP_001418946.1 PHA03247 <39..186 CDD:223021 42/227 (19%)
Homeodomain 229..283 CDD:459649 27/53 (51%)

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