DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Noto

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001178943.1 Gene:Noto / 502857 RGDID:1562910 Length:245 Species:Rattus norvegicus


Alignment Length:130 Identity:41/130 - (31%)
Similarity:68/130 - (52%) Gaps:15/130 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 MANNSSSPGSNV------------NAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQI 405
            |.:.|..||.||            .:::.|...........:....:|: |.:|:.||.|:.:|:
  Rat   103 MCSMSCMPGLNVTHLFCQQGLRLTGSELPSCLGPLKRAPTVNLQDHNTE-RHQKRVRTMFSEQQL 166

  Fly   406 FELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTN--NEAAEHKSSNAK 468
            .||||:|..:..|...||.::|..|.:||.||:|||||||.|::||..:.:  .:|.|..|::::
  Rat   167 GELEKVFAKQHNLVGKERAQLAARLHLTENQVRIWFQNRRVKYQKQQKLKSPPPDAMEEPSNSSE 231

  Fly   469  468
              Rat   232  231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 27/55 (49%)
NotoNP_001178943.1 Homeodomain 155..211 CDD:459649 27/55 (49%)

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