DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Lbx2

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001102714.1 Gene:Lbx2 / 500224 RGDID:1561172 Length:196 Species:Rattus norvegicus


Alignment Length:209 Identity:54/209 - (25%)
Similarity:87/209 - (41%) Gaps:40/209 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 SQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQ 369
            :.|||:|..    .|.|:..:.         |:..|..:|.....::|.  :.:..|.:..|...
  Rat    14 ADILGRSMV----PGAPSEPRL---------PEAGPDPASPLCALEELA--SKTFQGHSPRAPQP 63

  Fly   370 SNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTE 434
            |...:..|.    .....|..||::|:||.||.:|:.|||:.|..:|||:.|||..:|..|.:..
  Rat    64 SEGRAVPEA----PPGPGTGVRRRRKSRTAFTPQQVLELERRFVFQKYLAPSERDGLAARLGLAN 124

  Fly   435 TQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPTDKRSSNATSPTVGNA 499
            .||..||||||.|.|:       :..|.::..|...........|...|     .:|:||     
  Rat   125 AQVVTWFQNRRAKLKR-------DVEEMRADLASLCGLSPGVLCPPALP-----DSASSP----- 172

  Fly   500 ATIAEIKKSPKSPN 513
                :::.:|..|:
  Rat   173 ----DLQPTPSGPD 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 27/55 (49%)
Lbx2NP_001102714.1 Homeodomain 84..140 CDD:459649 27/55 (49%)

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