Protein Alignment NK7.1 and Hoxa13

DIOPT Version :10

• Sequence 1: NP_650357.2
• Gene: NK7.1 / 41747
• FlyBaseID: FBgn0024321
• Length: 721
• Species: Drosophila melanogaster
• Sequence 2: NP_001258284.1
• Gene: Hoxa13 / 500129
• RGDID: 1562483
• Length: 386
• Species: Rattus norvegicus
• Alignment Length: 354
• Identity: 79/354 - (22%)
• Similarity: 113/354 - (31%)
• Gaps: 124/354 - (35%)

  Fly   192 PHSIADILGMSFVKKERPEVAFDAQGPAKSPNSILKPYQEQQPIRSSSISMSDASEEESAAVAGA 256
            ||..|...|.:|     ...|..|...|.:.|..........|:...:.:...::..|:...|.|
  Rat    59 PHPAAAAAGGNF-----SVAAAAAAAAAAAANQCRNLMAHPAPLAPGAAAAYSSAPGEAPPTAAA 118

  Fly   257 TSAATAAAAVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMPATKQSQILGKSATKKESSGKP 321
            .:||.||||.||.                     :..|:..|.||..    .|..|.|:.|....
  Rat   119 AAAAAAAAAAAAA---------------------AASSSGGPGPAGP----AGAEAAKQCSPCSA 158

  Fly   322 AAKKKKLSSTVALPPDISPTG---------------------SSDSLMRDKLM------ANNSSS 359
            ||:..  |...|||.....:|                     |:.:...||.|      |...||
  Rat   159 AAQSS--SGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAFADKYMDTAGPAAEEFSS 221

  Fly   360 -------------------------------------PG--------------------SNVNAQ 367
                                                 ||                    :..|.|
  Rat   222 RAKEFAFYHQGYAAGPYHHHQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQ 286

  Fly   368 M-----QSNANSTLETTEDDSDSGSTDA---RRKKKARTTFTGRQIFELEKMFENKKYLSASERT 424
            |     |:......::|..|..|..:||   ||.:|.|..:|..|:.|||:.:...|:::..:|.
  Rat   287 MYCPKEQTQPPHLWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRR 351

  Fly   425 EMAKLLMVTETQVKIWFQNRRTKWKKQDN 453
            .::....::|.||.|||||||.|.||..|
  Rat   352 RISATTNLSERQVTIWFQNRRVKEKKVIN 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NK7.1	NP_650357.2	Homeodomain	394..450	CDD:459649	20/55 (36%)
Hoxa13	NP_001258284.1	HoxA13_N	<151..222	CDD:463521	15/72 (21%)
		Homeodomain	321..377	CDD:459649	20/55 (36%)