DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NK7.1 and Abd-B

DIOPT Version :9

Sequence 1:NP_001247103.1 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster


Alignment Length:520 Identity:143/520 - (27%)
Similarity:200/520 - (38%) Gaps:137/520 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VKDQQQQQQQQQQLH------HLQQQHHH----------------------QQQQQQQQQQQSNS 64
            ::.||||||||:|.|      ||||.|||                      ||||||||.....|
  Fly     6 LQQQQQQQQQQEQQHLQEQQQHLQQLHHHAHHHLPQPLHTTSHHHSAHPHLQQQQQQQQHAVVAS 70

  Fly    65 DLYKMACNGYNYSSPLTIPPTSMTTHMVSPIGNSKEKLVNMLRVRDNNNMASTISDSPPTTFLQK 129
            ....:.......|:|.|   .|..||.|                        ...|.||...:..
  Fly    71 SPSSVLQQQQQQSTPTT---HSTPTHAV------------------------MYEDPPPVPLVAV 108

  Fly   130 QLEAVVAPRPSSVHPQHQQPQQQTVQLQQQRRSVSTPA------ITTTPGPPTNWHAHV----YD 184
            |.:.:.||:      |.||.|||  |.|||::..:||.      ..|..||......|:    :.
  Fly   109 QQQHLPAPQ------QQQQLQQQ--QQQQQQQLATTPVAGALSPAQTPTGPSAQQQQHLTSPHHQ 165

  Fly   185 RLPPHPTPHSIADILGMSFVKKERPEVAFDAQGPAKSPNSILKPYQEQQPIRSSSISMSDASEEE 249
            :||...||:|:|.....:..::::.:.|..|.|..:    |:.|       .::|:|.|..|.::
  Fly   166 QLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQ----IVAP-------TTASVSPSSVSSQK 219

  Fly   250 -----SAAVAGATSAATAAAAVAATITAATVATPL------DQPLNLCVVKKSRDSNNS---PMP 300
                 |..:|.....|..|.....|.|:|.|....      |:..|........|..:.   |.|
  Fly   220 EDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYP 284

  Fly   301 ATK--QSQILGKSATKKESSGKPAA----------------KKKKLSSTVALPPDISPTGSSDSL 347
            .|:  ..|..|.:....:::...||                :..:.:||.:..|   ||.||...
  Fly   285 ETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEP---PTYSSPGG 346

  Fly   348 MRDKLMANNSS---SPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELE 409
            :|.....|.||   |.|.:|.|......|..|...     :|....|:|:|..:.|   |..|||
  Fly   347 LRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEW-----TGQVSVRKKRKPYSKF---QTLELE 403

  Fly   410 KMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKK-------QDNVTNNEAAEHKSSNA 467
            |.|....|:|..:|.|:|:.|.:||.||||||||||.|.||       |.|..||.::.|..:.|
  Fly   404 KEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQNNNNNSSSNHNHAQA 468

  Fly   468  467
              Fly   469  468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_001247103.1 Homeobox 397..449 CDD:278475 26/51 (51%)
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 28/55 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I5492
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.050

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