DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and hoxc8

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001006787.1 Gene:hoxc8 / 448482 XenbaseID:XB-GENE-480999 Length:242 Species:Xenopus tropicalis


Alignment Length:160 Identity:47/160 - (29%)
Similarity:71/160 - (44%) Gaps:20/160 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 DISPTGSSDSLMRDKLM-ANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGST--------DARR 392
            |.|.....::|.|..|. |...:|.....:.:..||.|::......:.:|..:        .|..
 Frog    84 DASKFYGYEALPRQSLYGAQQEASVVQYPDCKSSSNTNTSEGQGHLNQNSSPSLMFPWMRPHAPG 148

  Fly   393 KKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNN 457
            ::..|.|::..|..||||.|....||:...|.|::..|.:||.||||||||||.||||::|    
 Frog   149 RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENN---- 209

  Fly   458 EAAEHKSSNAKPGATGTATTTPSGEPTDKR 487
                   .:..|||.....|...|...:::
 Frog   210 -------KDKLPGARDEEKTEEEGNEEEEK 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 27/55 (49%)
hoxc8NP_001006787.1 Homeodomain 150..206 CDD:459649 27/55 (49%)

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