DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and nkx6.1

DIOPT Version :9

Sequence 1:NP_001247103.1 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001002475.1 Gene:nkx6.1 / 436748 ZFINID:ZDB-GENE-040718-178 Length:312 Species:Danio rerio


Alignment Length:479 Identity:113/479 - (23%)
Similarity:158/479 - (32%) Gaps:179/479 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 MLRV--RDNNNMASTISDSPPTTFLQKQLEAVVAPRP----------SSVHPQHQQPQQQTVQLQ 157
            ||.|  .|.:..::.:.::||...|....|......|          ||..|....|....:   
Zfish     1 MLAVGQMDGSRQSAFLLNTPPLAALHSMTEMKTPLYPAYPLSSTGPASSTSPTATSPNPGGI--- 62

  Fly   158 QQRRSVSTPAITTTPGPPTNWHAHVYDRLPPHPTPHSIADILGMSFVKKERPEVAFDAQGPAKSP 222
                .||:|.|.|:.|    ..|....:.....|||.|.|||       .||.||.       ||
Zfish    63 ----PVSSPGIKTSSG----LSALASAQQCAIATPHGINDIL-------SRPSVAC-------SP 105

  Fly   223 NSILKPYQEQQPIRSSSISMSDASEEESAAVAGATSAATAAAAVAATITAATVATPLDQPLNLCV 287
            ..||          |.....|..|......:..:.|||..|.|                      
Zfish   106 AGIL----------SGLPRFSSLSPPPPPGLYFSPSAAAVAVA---------------------- 138

  Fly   288 VKKSRDSNNSPMPATKQSQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKL 352
                    ..|.|.|   ::.|::                        |...|........||  
Zfish   139 --------RYPKPLT---ELPGRT------------------------PIFWPGVMQSPHWRD-- 166

  Fly   353 MANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKY 417
             |..:.||          :.||.|.    |.|.      ::|..|.||:|:|||.|||.||..||
Zfish   167 -ARFACSP----------HQNSVLL----DKDG------KRKHTRPTFSGQQIFALEKTFEQTKY 210

  Fly   418 LSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGE 482
            |:..||..:|..|.:||:|||:|||||||||:|:      .|||..|:.                
Zfish   211 LAGPERARLAYSLGMTESQVKVWFQNRRTKWRKR------HAAEMASAK---------------- 253

  Fly   483 PTDKRSSNATSPTVGNAATIAEIKKSPKSPNRGSNNNNNNTLNNNVNNSEGKVPAKQSTTKIKKQ 547
               |:..:.|....|            .|.|...:::.|..|:.|.::               ::
Zfish   254 ---KKQDSETERLKG------------ASENEDDDDDYNKPLDPNSDD---------------EK 288

  Fly   548 LNALLEKTVKTANQAHRSAELESS 571
            :..||:|....:.....::|.|||
Zfish   289 ITQLLKKHKPNSALIIHTSENESS 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_001247103.1 Homeobox 397..449 CDD:278475 32/51 (63%)
nkx6.1NP_001002475.1 Homeobox 189..242 CDD:278475 32/52 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576049
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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