DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Hmx

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster


Alignment Length:769 Identity:163/769 - (21%)
Similarity:259/769 - (33%) Gaps:248/769 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HLEAAEMAS--GALAHNYGIVKDQQQQQQQQQQLHHLQQQHHHQQQQQQQQQQQSNSDLYKMACN 72
            ||..|..|:  ..|.|.......|||||.|.||.|  ||.|..:.....:..:::..|..:....
  Fly   113 HLHPAHGATHPALLQHALTPTGQQQQQQLQVQQQH--QQSHVERLSPPMKSPERNGGDEVQGHSL 175

  Fly    73 GYNYSSPLTIPPTSMTTHMVSPIGNSKEKLVNMLRVRDNNN------------------------ 113
            ..|.|..|....|     ..|....:....|....:.:|:|                        
  Fly   176 NNNNSKALNHNNT-----CASAAAAAAAAAVAAANLSNNSNDSNGSSGGGGGKSTTGSNGFTSFS 235

  Fly   114 MASTISDSPPTTFLQKQLEAVVAPRPSSVHPQHQQPQQQTVQ-----LQQQRRSVSTPAITTTPG 173
            ::|.:|.|.|..  :.....::.|.|....|....||...:.     :.|........|....||
  Fly   236 ISSILSRSEPAK--KNGAAGLITPIPQLPQPGAGGPQDAAMLSRLGFISQWGALAGRYAALCPPG 298

  Fly   174 PPTNWHAHVYDRLPPHPTPHSIADILGMSFVKKERPEVAFDAQGPAKSPNSILKPYQEQQPIRSS 238
            .|  |   ...|||.|...|.                        :.|.|:...|        .|
  Fly   299 WP--W---APQRLPFHSPTHD------------------------SSSTNTTENP--------PS 326

  Fly   239 SISMSDASEEESAAVAGATSAATAAAAVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMPATK 303
            ..|||..:...::....:::.|:              .:|...||:...         .|:.:.:
  Fly   327 PTSMSPNNNNNNSNTTASSNQAS--------------KSPSHHPLHPLY---------HPLGSQQ 368

  Fly   304 QSQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQM 368
            |.|...:.....:....|..::::.......|...|.:|...||....    :....||:....:
  Fly   369 QQQQQQQHQQHPQQQQHPQQQQQQHPHQPTTPTSSSSSGGGSSLTHHP----HPHLTGSHGGYLL 429

  Fly   369 QSNANSTLE-----TTEDDSDSGSTD---------ARRKKKARTTFTGRQIFELEKMFENKKYLS 419
            .|::|.:.|     ..|||...|.:|         ::||||.||.|:..|:|:||..|:.|:|||
  Fly   430 PSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKKTRTVFSRAQVFQLESTFDLKRYLS 494

  Fly   420 ASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPT 484
            :|||..:|..|.:|||||||||||||.|||:|      .|||.:::|                  
  Fly   495 SSERAGLAASLRLTETQVKIWFQNRRNKWKRQ------LAAELEAAN------------------ 535

  Fly   485 DKRSSNATSPTVGNAATIAE-IKKSPKSPNRGSNNNNNNTLNNNVNNSEGKVP------------ 536
                       :.|.|..|: :.:.|...:.|:              :.|.||            
  Fly   536 -----------MANMAHAAQRLVRVPVLYHDGT--------------TAGFVPPPPPHHHPMQYY 575

  Fly   537 -AKQSTTKIKKQLNALLEKT--VKTANQAHRSAELESSDQKPAVEKRPNNSNENQLLHQRLHQHA 598
             |.::|:..:..|::|:...  :.||               |....:|.||    :.|       
  Fly   576 AAARNTSPPRPPLSSLVXGVGCLATA---------------PMSLLKPPNS----MAH------- 614

  Fly   599 IPLTVEPAAPLEQTEKLDIKREESPQHRELQLSLQRAAIQNGQLTEMDFESKLAASKISIALAMA 663
             |...:|..|             :|.|.:     ||:.:...||||.|.:|              
  Fly   615 -PPHPQPPPP-------------APLHMQ-----QRSFLGCEQLTETDMDS-------------- 646

  Fly   664 NKQMQPEKRVKTESSSSEGEGDGDGEEEEEEEEVSSSEHGDS---IEAHDSQDQ 714
            :.:.:....:..|.::.:.|.|   ||:|....|.|:....|   :|:.:|..|
  Fly   647 DSEQERSHMMDDEDAAIDVEAD---EEQESASPVPSATPPKSSLCLESKESGGQ 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 34/55 (62%)
HmxNP_001262674.1 Homeodomain 469..525 CDD:459649 34/55 (62%)

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