DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and pb

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster


Alignment Length:417 Identity:98/417 - (23%)
Similarity:155/417 - (37%) Gaps:116/417 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 SPTGSSDSL-----MRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKART 398
            :|.| .||:     |::|    .:|...||.|.|   ..||..|...::.        ..::.||
  Fly   155 TPDG-MDSVPEYPWMKEK----KTSRKSSNNNNQ---GDNSITEFVPENG--------LPRRLRT 203

  Fly   399 TFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQ-----------D 452
            .:|..|:.||||.|...|||....|.|:|..|.:||.|||:||||||.|.|:|           |
  Fly   204 AYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKD 268

  Fly   453 NVTNNEAAEHKSSNAKPGATGTATTTPSGEPTDKRSSNATSPTVGNAATIAEIKKSPKSPNRGSN 517
            ::..::.....:||:|....|  ...||.:..|..|:                       :||.|
  Fly   269 SLKGDDDQSDSNSNSKKSCQG--CELPSDDIPDSTSN-----------------------SRGHN 308

  Fly   518 NNNNNTLNNNVNNSEGKV-PAKQSTTKIKKQLNALLEKTVKTANQAHRSAELESSDQKPAVEKRP 581
            ||..:..||  |.|.|.: |.....|.|..  |.:...||..:|.....:.:.||          
  Fly   309 NNTPSATNN--NPSAGNLTPNSSLETGISS--NLMGSTTVSASNVISADSSVASS---------- 359

  Fly   582 NNSNENQLLHQRLHQHAIPLTVEPAAPLEQTEKLDIKREESPQ--HRELQLSLQRAA---IQNGQ 641
                                 |.....:|::..:.:|:::..|  .:|...:..:|:   .:|..
  Fly   360 ---------------------VSLDEDIEESSPIKVKKKDDGQVIKKEAVSTSSKASPFGYENST 403

  Fly   642 LTEMDFESKLAASKISIA---LAMANKQMQ-PEKRVKTE---SSSSEGEGDGDG----------E 689
            .:.:.|.....||.:..|   .|:..|:.| ....:.|.   |.|:.|.|.|.|          .
  Fly   404 PSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAANAIATPTPLSDSNSGNGSGGGPAGGYFPGYYP 468

  Fly   690 EEEEEEEVSSSE-HGDSIEAHDSQDQD 715
            ..:::::|...: |....:....|.||
  Fly   469 SPKQQQQVQQQQLHPQQQQLPQQQPQD 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 28/55 (51%)
pbNP_476669.3 Homeodomain 199..255 CDD:459649 28/55 (51%)

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