DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and nkx1.2lb

DIOPT Version :9

Sequence 1:NP_001247103.1 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_998713.1 Gene:nkx1.2lb / 407077 ZFINID:ZDB-GENE-040615-2 Length:373 Species:Danio rerio


Alignment Length:419 Identity:107/419 - (25%)
Similarity:150/419 - (35%) Gaps:131/419 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 ASTISDSPPTTFLQKQLEAVVAPRPSSVHPQHQQPQQQTVQLQQQRRSVSTPAITTTPGPPTNWH 179
            |..|..:|......|:|.|...|..:.|..:...|.:..   :...|....||     |.|...|
Zfish    17 AGVIVVAPQDGMDDKRLAAGELPVFNCVGGRDALPAESR---ETSPRHEPVPA-----GAPPTVH 73

  Fly   180 AHVYDRLPPHPTPHSIADILGMS-FV-KKERP-----EVAFDAQGPAKSPNSIL--KPYQEQQPI 235
                     ..|..|:.|||..: |. |::.|     |.||.|:..:...|..:  |.|||....
Zfish    74 ---------RTTSFSVLDILDPNKFTSKRQTPNRTGCEFAFGAENRSDDSNHTIEHKSYQEDYDC 129

  Fly   236 RSSSISMSD-----ASEEESAAVAGATSAATAAAAVAATITAATVATPLDQPL--NLCVVKKS-- 291
            :.:|..:.|     :.|.||....|..|                     |..|  :||..:.|  
Zfish   130 KKTSGILKDGFVFRSDECESDFTRGNQS---------------------DSELQEDLCSEESSAL 173

  Fly   292 RDSNNSPMPATKQSQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANN 356
            ..:|::.....:....:.||                        ||...|             ..
Zfish   174 TGNNDAEFGQHEDDDSISKS------------------------PDGQQT-------------QQ 201

  Fly   357 SSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSAS 421
            |||.|.|...:.:...:.:      ||.||     :.::|||.||..|:..||..|::.:|||..
Zfish   202 SSSNGQNHQVKPKRKRSGS------DSKSG-----KPRRARTAFTYEQLVALENKFKSTRYLSVC 255

  Fly   422 ERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPTDK 486
            ||..:|..|.:|||||||||||||||||||:                |||..:|.|:..|     
Zfish   256 ERLNLALSLSLTETQVKIWFQNRRTKWKKQN----------------PGADTSAPTSGGG----- 299

  Fly   487 RSSNATSPTVGNAATIAEIKKSPKSPNRG 515
             ..|..|..:|..:.:     ||..|..|
Zfish   300 -GGNGPSNGLGGLSPL-----SPSPPMSG 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_001247103.1 Homeobox 397..449 CDD:278475 30/51 (59%)
nkx1.2lbNP_998713.1 Homeobox 231..283 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576054
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

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