DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Nkx2-4

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_038962557.1 Gene:Nkx2-4 / 366213 RGDID:1304985 Length:353 Species:Rattus norvegicus


Alignment Length:357 Identity:92/357 - (25%)
Similarity:137/357 - (38%) Gaps:77/357 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 PPHPTPHSIADILGMSFVKKERPEVAFDAQGPAKSPNSILKPYQEQQPIRSSSISMSDASEEESA 251
            |.|.||.|::|||.......::.....|...|..........|: ..|...||.:.:.|..:...
  Rat     5 PKHTTPFSVSDILSPIEETYKKFGGVMDGAPPGLGAPLGAAAYR-APPTGPSSQAAAVAGMQPPH 68

  Fly   252 AVAGATSAATAAAAVAATITAATVATPLDQPLNLCVVKKSRDS-----------NNSPMPATKQS 305
            |:||..:||.||||.||...|||...|..       |.:...|           |...:||....
  Rat    69 AMAGHNAAAAAAAAAAAAAAAATYHMPPG-------VSQFPHSAMGSYCNGGLGNMGELPAYTDG 126

  Fly   306 QILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQS 370
            ...|.:|                ::|.....:..|..||.|    :.|     .|.:.||.....
  Rat   127 MRGGAAA----------------AATGWYGANTDPRYSSIS----RFM-----GPSAGVNVAGMG 166

  Fly   371 NANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTET 435
            :.....:..:..:...:...|||:  |..|:..|::|||:.|:.:|||||.||..:|.::.:|.|
  Rat   167 SLTGIADAAKSLAPLHAAAPRRKR--RVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPT 229

  Fly   436 QVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPTDKR------------- 487
            ||||||||.|.|.|:|        |:.|::.......|.....|...|:.:|             
  Rat   230 QVKIWFQNHRYKMKRQ--------AKDKAAQQLQQEGGLGPPPPPPPPSPRRVAVPVLVKDGKPC 286

  Fly   488 SSNATSPTVGN----------AATIAEIKKSP 509
            .:.|.:||.|.          |:.:.|:..||
  Rat   287 QNGAGTPTPGQGGQQPQAPTPASELEELSSSP 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 27/55 (49%)
Nkx2-4XP_038962557.1 Homeodomain 188..244 CDD:459649 29/57 (51%)

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