DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NK7.1 and Meox1

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_063125617.1 Gene:Meox1 / 363684 RGDID:1308911 Length:328 Species:Rattus norvegicus


Alignment Length:254 Identity:57/254 - (22%)
Similarity:86/254 - (33%) Gaps:90/254 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 ASTISDSPPT--TFLQKQLEAVVAPRPS------SVHPQHQQPQQQTVQLQQQRRSVSTPAITTT 171
            ||.:...|||  :|.||......|..|.      :..| |..|:.:.:..:|.      ||...|
  Rat    32 ASGLPHYPPTPFSFHQKSDFPATAAYPDFSTSCLAATP-HSLPRAERIFNEQH------PAFPQT 89

  Fly   172 PGPPTNWHAHVYD---RLPPHPTPHS---------IAD----------ILG---------MSFVK 205
            |    :||..:.:   ||...|...:         :.|          :||         :|..|
  Rat    90 P----DWHFPISEAGQRLNLGPAGSAREMGAGSPGLVDGTGGLGEDCMVLGTIAHETEKKLSRRK 150

  Fly   206 KER--------PEVAFDA--QGPAKSPNSI------LKPYQEQQPIRSSSISMSDASEEE----- 249
            |||        ||...:|  .|.|:.|...      |..:.|.: :|.|    .|.::|.     
  Rat   151 KERSGQSVVPEPENEVEACEGGSARVPTGAGPRGWRLCSFSEFR-VRCS----KDQNQERLNERP 210

  Fly   250 --------SAAVAGATSAATAAAAVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMP 300
                    :...:|.|.||.|.:.|...:.:...   |:.|..|.   :.|.|.:||.|
  Rat   211 FQLPPPTPTLTSSGPTQAACAHSYVDVKLPSVGA---LNFPEGLA---QHRPSLSSPFP 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649
Meox1XP_063125617.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.