Protein Alignment NK7.1 and scro

DIOPT Version :10

• Sequence 1: NP_650357.2
• Gene: NK7.1 / 41747
• FlyBaseID: FBgn0024321
• Length: 721
• Species: Drosophila melanogaster
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 526
• Identity: 116/526 - (22%)
• Similarity: 181/526 - (34%)
• Gaps: 148/526 - (28%)

  Fly   128 QKQLEAVVAPRPSSVHPQHQQPQQQTVQLQQQRRSVSTPAITTTPGPPTNWHAHVYDRLPPHPTP 192
            ::.|...::|:.:.:|....|..|.....:......||....:|.......|.|
  Fly    34 EEDLVMSLSPKDTLIHTAISQHHQVDTSTKLNTNETSTQNTVSTAAAAAVAHHH----------- 87

  Fly   193 HSIADILGMSFVKKERPEVAFDAQGPAK-SPNSILKPYQEQ-----------QPIRSSSISMSDA 245
            |:::.|..:..:..:.....|::..... |...||.|.:|.           .|.||:|.|.|..
  Fly    88 HNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSIN 152

  Fly   246 SEEESAAVAGATSAATAAAAVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMPATKQSQILGK 310
            |                    ..|:|.:|:|.|.                              .
  Fly   153 S--------------------PGTLTTSTMANPY------------------------------A 167

  Fly   311 SATKKESSGKPAAKKKKLSSTVALPPD-ISPTGSSDSLMRDKLMANNSSSPGSNVN-------AQ 367
            ..|...|.|         ..|...|.| :|..|....      |.|::|..||..|       ..
  Fly   168 MGTLYHSPG---------VQTYCGPTDNLSLAGHYTD------MRNSASWYGSTANDPRFAISRL 217

  Fly   368 MQSNANSTLE----------TTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASE 422
            |.|:|:.|:.          .:..||........:::|.|..||..|::|||:.|:.::||||.|
  Fly   218 MSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPE 282

  Fly   423 RTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTP----SGEP 483
            |..:|.|:.:|.|||||||||.|.|.|:|   ...:|...::.:.:|.::......|    .|:|
  Fly   283 REHLASLIHLTPTQVKIWFQNHRYKCKRQ---AKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKP 344

  Fly   484 TDKRSSNATSPTVGNAATIAEIKKSPKSPNRGSNNNNN---------NTLNNNVNNSEGKVPAKQ 539
            ....:|::.|...|..:|.|       ..|.||.||.|         ..::..:|...|..|...
  Fly   345 CSGNNSSSQSQQHGTNSTSA-------GNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNSH 402

  Fly   540 STTKIKKQLNALLEKTVKTANQAHRSAELESSDQKPAVEKRPNNS------NENQLL---HQRLH 595
            |.......|.:.  .||..:|.|..        |:|......:||      |:|..:   ||:..
  Fly   403 SPDTSSSLLASY--GTVGGSNVAML--------QQPCNNTLMSNSLAMAYRNQNNFISNGHQQQC 457

  Fly   596 QHAIPL 601
            ...:||
  Fly   458 GGYLPL 463

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NK7.1	NP_650357.2	Homeodomain	394..450	CDD:459649	29/55 (53%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	29/55 (53%)