DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and lms

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_555988.3 Gene:lms / 3289950 VectorBaseID:AGAMI1_011670 Length:479 Species:Anopheles gambiae


Alignment Length:298 Identity:89/298 - (29%)
Similarity:127/298 - (42%) Gaps:61/298 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 NSILKPYQEQQPIRSSSISMSDASEEESAAVAGATSAATAAAAVAATITAATVAT-PLDQPLNLC 286
            ||.........|:.::.:..|.:.|...|....:.:|:|::||....:.....:: |:..|..| 
Mosquito    25 NSTPSSMHHVDPVANNRVKNSFSIEHLLAKPDRSGTASTSSAACYRGMDDRLASSYPIAHPAQL- 88

  Fly   287 VVKKSRDSNNSPMPATKQSQILGKSAT--------KKESSGKPAAKKKKLSSTVALPPDISPTGS 343
                    :||.:..|    ::.:||:        |.|:|..|.|..:        ||.      
Mosquito    89 --------HNSMVYQT----LMTRSASAVEFLDVNKNETSAVPFAADR--------PPS------ 127

  Fly   344 SDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDAR--RKKKARTTFTGRQIF 406
                     ....||||.|:.|.....|.:   |...:.|.||...|.  |||:.||.|:..||.
Mosquito   128 ---------ERAESSSPESSCNEDTMDNCS---EIASEGSASGGLAAHDDRKKRPRTAFSAAQIK 180

  Fly   407 ELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSN----- 466
            .||..||..||||.::||.:||.|.:||||:||||||||||||::........|.|..|.     
Mosquito   181 ALETEFERGKYLSVAKRTALAKQLHLTETQIKIWFQNRRTKWKRKYTADVESLASHYYSQLGIGS 245

  Fly   467 -AKPGATGTA----TTTPSGEPTDKRSSNATSPTVGNA 499
             |:|...|..    :.||:| ||..:|.....|..|.|
Mosquito   246 FARPMVVGDRLWLFSQTPNG-PTPVQSLLLNGPQPGAA 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 34/55 (62%)
lmsXP_555988.3 None

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