DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NK7.1 and HOXC13

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_059106.2 Gene:HOXC13 / 3229 HGNCID:5125 Length:330 Species:Homo sapiens


Alignment Length:345 Identity:65/345 - (18%)
Similarity:107/345 - (31%) Gaps:128/345 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 PNSILKPYQEQQPIRSSSISMSDASEEESAAVAGATSAATAAAAVAATITAATVATPLDQPLNLC 286
            |.|::..|::            .|:|.......|.....|..|....:..:...|..:|...:.|
Human    12 PESLMYVYED------------SAAESGIGGGGGGGGGGTGGAGGGCSGASPGKAPSMDGLGSSC 64

  Fly   287 VVKKSRDSNNSPM----PATKQSQILG--KSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSD 345
            .....||....|:    ||.     ||  :.|...:.....||::       ..||...||.||.
Human    65 PASHCRDLLPHPVLGRPPAP-----LGAPQGAVYTDIPAPEAARQ-------CAPPPAPPTSSSA 117

  Fly   346 SL-----------------------------MRDKLMANNSSSPGSNVNAQMQSNA--------- 372
            :|                             ..||....:.:.||.:::::.:..|         
Human   118 TLGYGYPFGGSYYGCRLSHNVNLQQKPCAYHPGDKYPEPSGALPGDDLSSRAKEFAFYPSFASSY 182

  Fly   373 -----------------------------------------NSTLETTEDDSDSGS--------- 387
                                                     :|.:..:::.|.|..         
Human   183 QAMPGYLDVSVVPGISGHPEPRHDALIPVEGYQHWALSNGWDSQVYCSKEQSQSAHLWKSPFPDV 247

  Fly   388 -------TDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRR 445
                   :..||.:|.|..:|..|:.||||.:...|:::..:|..::....::|.||.|||||||
Human   248 VPLQPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRR 312

  Fly   446 TKWKKQDNVTNNEAAEHKSS 465
            .|.||   |.:...|.|..|
Human   313 VKEKK---VVSKSKAPHLHS 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 21/55 (38%)
HOXC13NP_059106.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..50 3/19 (16%)
HoxA13_N 54..168 CDD:463521 24/125 (19%)
Homeodomain 261..312 CDD:459649 18/50 (36%)

Return to query results.
Submit another query.