Protein Alignment NK7.1 and Hoxc13

DIOPT Version :10

• Sequence 1: NP_650357.2
• Gene: NK7.1 / 41747
• FlyBaseID: FBgn0024321
• Length: 721
• Species: Drosophila melanogaster
• Sequence 2: XP_235695.3
• Gene: Hoxc13 / 315337
• RGDID: 1563984
• Length: 328
• Species: Rattus norvegicus
• Alignment Length: 339
• Identity: 61/339 - (17%)
• Similarity: 102/339 - (30%)
• Gaps: 118/339 - (34%)

  Fly   222 PNSILKPYQEQQPIRSSSISMSDASEEESAAVAGATSAATAAAAVAATITAATVATPLDQPLNLC 286
            |.|::..|::              |..||.:..|........|....:..:...|..:|.....|
  Rat    12 PESLMYVYED--------------SAAESGSGGGGGGGGAGGAGGGCSGASPGKAPSMDGLGGSC 62

  Fly   287 VVKKSRDSNNSPMPATKQSQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSL---- 347
            .....||....|:.|...:.:.............|.|.::      ..||...||.||.:|
  Rat    63 PASHCRDLLPHPVLARPPAPLGAPQGAVYTDIPAPEAARQ------CAPPPAPPTSSSATLGYGY 121

  Fly   348 -------------------------MRDKLMANNSSSPGSNVNAQMQSNA--------------- 372
                                     ..||....:.:.||.:::::.:..|
  Rat   122 PFGGSYYGCRLSHNVNLQQKPCSYHPGDKYPEPSGALPGDDLSSRAKEFAFYPSFASSYQAMPGY 186

  Fly   373 -----------------------------------NSTLETTEDDSDSGS--------------- 387
                                               :|.:..:::.|.|..
  Rat   187 LDVSVVPGISGHPEPRHDALIPVEGYQHWALSNGWDSQVYCSKEQSQSAHLWKSPFPDVVPLQPE 251

  Fly   388 -TDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQ 451
             :..||.:|.|..:|..|:.||||.:...|:::..:|..::....::|.||.|||||||.|.||
  Rat   252 VSSYRRGRKKRVPYTKVQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKK- 315

  Fly   452 DNVTNNEAAEHKSS 465
              |.:...|.|..|
  Rat   316 --VVSKSKAPHLHS 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NK7.1	NP_650357.2	Homeodomain	394..450	CDD:459649	21/55 (38%)
Hoxc13	XP_235695.3	HoxA13_N	52..166	CDD:463521	20/119 (17%)
		Homeodomain	259..310	CDD:459649	18/50 (36%)