DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and pdx1

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_571518.2 Gene:pdx1 / 30721 ZFINID:ZDB-GENE-990415-122 Length:246 Species:Danio rerio


Alignment Length:257 Identity:65/257 - (25%)
Similarity:90/257 - (35%) Gaps:88/257 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 ATPL---DQPLNLCVV----KKSRDSNNSP---MPATKQSQILGKSATKKESSGKPAAKKKKLSS 330
            |:||   ||| ||..:    ..|||....|   :|.|.|:.:                       
Zfish    46 ASPLGAQDQP-NLTDITSYNMSSRDDLAGPHLHLPQTSQTSL----------------------- 86

  Fly   331 TVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKK 395
                 ..:...|.|..|..|:   |....|    ...|:|..:.|.......:.....:|...|:
Zfish    87 -----QSLGGYGDSLDLCGDR---NRYHLP----FPWMKSTKSHTHAWKGQWTGPYMVEAEENKR 139

  Fly   396 ARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAA 460
            .||.:|..|:.||||.|...||:|...|.|:|..|.:||..:||||||||.||||::        
Zfish   140 TRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTERHIKIWFQNRRMKWKKEE-------- 196

  Fly   461 EHKSSNAKPGATGTATTTPSGEPTDKRSSNATSPTVGNAATIAEIK----------KSPKSP 512
                                    |||.:....|...::.|..::|          ..|.||
Zfish   197 ------------------------DKRRARGVDPEQDSSITSGDLKDESCVGTATLAGPPSP 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 29/55 (53%)
pdx1NP_571518.2 Homeodomain 138..194 CDD:459649 29/55 (53%)

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