DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and nkx2.3

DIOPT Version :9

Sequence 1:NP_001247103.1 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_571498.1 Gene:nkx2.3 / 30698 ZFINID:ZDB-GENE-990415-178 Length:321 Species:Danio rerio


Alignment Length:241 Identity:71/241 - (29%)
Similarity:110/241 - (45%) Gaps:36/241 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 LSSTVALPPDISPT-GSSDSLMRDKLMANNSSSPGSNVNA-QMQSNANSTLETTEDDSDSGSTDA 390
            :.|:::.|..:.|. |..|:.:.|:|..:.:.|.|:.:.. :.::..:|..|..:..        
Zfish    83 VESSLSPPMFVHPALGHVDTKLEDELEDHETKSCGAILRTPECEAEVHSDTERAQRQ-------- 139

  Fly   391 RRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVT 455
            |.::|.|..|:..|:||||:.|:.::||||.||..:|..|.:|.|||||||||||.|.|:|....
Zfish   140 RTRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASTLKLTSTQVKIWFQNRRYKCKRQRQDK 204

  Fly   456 NNEAAEHKSSNAKPGATGTATTTPSGEP--TDKRSSNAT---SP---------TVGNAA-TIAEI 505
            ..|.|.|... ..|...........|:|  |..:|.|.|   :|         :..||| |....
Zfish   205 TLEMAGHHHP-PPPRRVAVPVLVRDGKPCLTGSQSYNTTYAVNPGPYTYNGYSSYNNAAYTNPYS 268

  Fly   506 KKSPKSPNRGSNNNNNNTLNNNVNN---------SEG-KVPAKQST 541
            ...|..|...:|.:.|..::.::||         |:| .|.|.|.|
Zfish   269 CTYPSLPPLPANTSTNALMSMSLNNLGTYSQPQTSQGTPVSACQGT 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_001247103.1 Homeobox 397..449 CDD:278475 29/51 (57%)
nkx2.3NP_571498.1 HOX 142..198 CDD:197696 30/55 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576034
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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