DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and msx1a

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_571348.1 Gene:msx1a / 30527 ZFINID:ZDB-GENE-980526-312 Length:233 Species:Danio rerio


Alignment Length:221 Identity:64/221 - (28%)
Similarity:94/221 - (42%) Gaps:51/221 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 SATKKESSGKPAAKKKKLSSTV-----ALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQS 370
            |...:|.:|...|.:.::.:.|     |..|.|.|. |.::||.|:  ..|..||  :.:|::..
Zfish     9 SQAAEEDAGVMLAGQTEMQTRVTVQEDAQRPKILPF-SVEALMADR--RPNRGSP--DADARLGF 68

  Fly   371 NANSTLETTEDDSDSGSTDARR--------------------KKKARTTFTGRQIFELEKMFENK 415
            :........:.:|...||...|                    .:|.||.|:..|:..||:.|..|
Zfish    69 SVEVLQLPVKAESPERSTWVPRARFSPSRLSPPACPLRKHKTNRKPRTPFSTAQLLALERKFRQK 133

  Fly   416 KYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAK----PGATGTAT 476
            :|||.:||.|.:..|.:|||||||||||||.|.|:.     .||...|...|.    |.|.|  .
Zfish   134 QYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRL-----QEAELEKLKMAAKPLLPPAFG--I 191

  Fly   477 TTPSG----------EPTDKRSSNAT 492
            :.|:|          .|..:.|:|.:
Zfish   192 SFPAGAHIPAYSAGSHPFHRHSANVS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 30/55 (55%)
msx1aNP_571348.1 Homeodomain 112..168 CDD:459649 30/55 (55%)

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