DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and hoxd13a

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_571244.2 Gene:hoxd13a / 30407 ZFINID:ZDB-GENE-990415-119 Length:256 Species:Danio rerio


Alignment Length:231 Identity:54/231 - (23%)
Similarity:98/231 - (42%) Gaps:37/231 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 TSAATAAAAV--AATITAATVATPLDQPLNL--------CVVKKS-RDSNNSPMP--ATKQSQIL 308
            ||.|...:||  ..::...:::.....|.|:        |.::.| :...|:..|  ..||:   
Zfish    26 TSGAPVLSAVDRPTSVCNESISPYFSFPSNIGSGSFTFGCHLENSYKVPQNAVFPPGVAKQN--- 87

  Fly   309 GKSATKKESSGKPAAKKKKLS-------STVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNA 366
            |:.|.|....|:.::..|:.:       |...:|..|.......::|.| |......:...:.:.
Zfish    88 GQFANKPVDHGEASSWLKEFAFYQGCARSYPRIPAFIDLPVVQRAMMGD-LRHETCLTMEGHQHW 151

  Fly   367 QMQSNANSTLETTEDDSDS-------------GSTDARRKKKARTTFTGRQIFELEKMFENKKYL 418
            ...:|.:|.|...:|.:.|             .::..:|.:|.|..:|..|:.|||:.:...|::
Zfish   152 DWSNNCSSQLYCFQDQTRSPHIWKPSLTEEAAAASFCQRGRKKRVPYTKFQLKELEREYNTTKFI 216

  Fly   419 SASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNV 454
            :...|..:|....::|.||.|||||||.|.||:.:|
Zfish   217 TKENRRRIASSTNLSERQVTIWFQNRRVKDKKRPDV 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 21/55 (38%)
hoxd13aNP_571244.2 Homeodomain 192..248 CDD:459649 21/55 (38%)

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