DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and hoxc11a

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_571240.1 Gene:hoxc11a / 30403 ZFINID:ZDB-GENE-990415-111 Length:306 Species:Danio rerio


Alignment Length:267 Identity:64/267 - (23%)
Similarity:105/267 - (39%) Gaps:52/267 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 AFDAQGPAKSPNSILKPY----QEQQPIRSSSISMSDASE----EESAAVAGATSAATAAAAVAA 268
            :|..|||::   .|..||    .:.||:|..|..:..:|:    ...|:...............:
Zfish    49 SFLPQGPSR---QITYPYSTNLSQVQPVRDVSYGLDPSSKWHHRSNYASCYSGEDLVHRDCLPPS 110

  Fly   269 TITAATVATPLDQPLNLCVVKKSRDSN-NSPMPATKQSQILGKS----------------ATKKE 316
            |:|...:.       |..|.......: ||..|:|.....:||:                :|..:
Zfish   111 TMTEMLMK-------NESVYSHHHQHHPNSSHPSTGFYTGVGKNNVLPQGFDRFFETAYCSTDNQ 168

  Fly   317 SSG-KPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTE 380
            |.. ...::..||.::...|..:|.....:....|:....||.|              .|...|:
Zfish   169 SEHCLQKSEMNKLETSSQQPTAVSAAREPEKDPEDEEEHTNSGS--------------CTSAATK 219

  Fly   381 DD--SDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQN 443
            |.  |.|..:...|.:|.|..::..||.|||:.|....|::..:|.:::::|.:|:.||||||||
Zfish   220 DGNASKSSHSSTPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQN 284

  Fly   444 RRTKWKK 450
            ||.|.||
Zfish   285 RRMKEKK 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 23/55 (42%)
hoxc11aNP_571240.1 DUF3528 42..167 CDD:432284 24/127 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..238 15/74 (20%)
Homeodomain 235..291 CDD:459649 23/55 (42%)

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