Protein Alignment NK7.1 and Cdx4

DIOPT Version :10

• Sequence 1: NP_650357.2
• Gene: NK7.1 / 41747
• FlyBaseID: FBgn0024321
• Length: 721
• Species: Drosophila melanogaster
• Sequence 2: NP_001100412.1
• Gene: Cdx4 / 302400
• RGDID: 1561529
• Length: 288
• Species: Rattus norvegicus
• Alignment Length: 281
• Identity: 69/281 - (24%)
• Similarity: 106/281 - (37%)
• Gaps: 86/281 - (30%)

  Fly   252 AVAG-ATSAATAAAAVAATITAATV-----------------------ATPLDQPLNLCVVKKSR 292
            :.|| .||..:.:...|:..|||.|                       ::|...|        ..
  Rat    25 STAGVGTSGGSGSPLPASNFTAAPVYPHYMGYPHMSNMDPHGPSLGAWSSPYSPP--------RE 81

  Fly   293 DSNNSPMPATKQSQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNS 357
            |.:..|.|    |..:|.......:|..||......|:       :.|||.          |..:
  Rat    82 DWSTYPGP----SSTMGTVPMNDMTSSSPAFGSPDYST-------LGPTGG----------AGGA 125

  Fly   358 SSPGSNVNAQMQSNANSTLETTEDDSDSGSTD---------------------ARRKKKARTTFT 401
            |:.||..:|     |:.:|.:.:..:..|:|.                     .|.|:|.|..:|
  Rat   126 SNGGSLPDA-----ASESLVSIDSGTSGGATSPSRSRHSPYAWMRKTVQVTGKTRTKEKYRVVYT 185

  Fly   402 GRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKK--QDNVTNNE----AA 460
            ..|..||||.|...:|::...::|:|..|.::|.||||||||||.|.:|  :..::..|    :.
  Rat   186 DHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKISQFENSGGSV 250

  Fly   461 EHKSSNAKPGATGTA-TTTPS 480
            :..|.:..||....| .||||
  Rat   251 QSDSGSISPGELPNAFFTTPS 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NK7.1	NP_650357.2	Homeodomain	394..450	CDD:459649	25/55 (45%)
Cdx4	NP_001100412.1	Caudal_act	13..174	CDD:461413	32/182 (18%)
		Homeodomain	179..234	CDD:459649	25/54 (46%)