DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Pdx1

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_074043.4 Gene:Pdx1 / 29535 RGDID:62387 Length:283 Species:Rattus norvegicus


Alignment Length:155 Identity:49/155 - (31%)
Similarity:71/155 - (45%) Gaps:41/155 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 STDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQ 451
            :.:....|:.||.:|..|:.||||.|...||:|...|.|:|.:|.:||..:||||||||.||||:
  Rat   140 AAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKE 204

  Fly   452 DNVTNNEAAEHKSSNAKPGATG-------TATTT-----------------PSGEPTDKR----- 487
            ::       :.:||....|..|       .|.|:                 |||.|...|     
  Rat   205 ED-------KKRSSGTTSGGGGGEEPEQDCAVTSGEELLALPPPPPPGGAVPSGVPAAAREGRLP 262

  Fly   488 SSNATSPTVGNAATIAEIKKSPKSP 512
            |..:.||   ..::||.::  |:.|
  Rat   263 SGLSASP---QPSSIAPLR--PQEP 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 29/55 (53%)
Pdx1NP_074043.4 Transactivation domain 13..73
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..81
Antp-type hexapeptide 118..123
Homeodomain 147..203 CDD:459649 29/55 (53%)
Nuclear localization signal. /evidence=ECO:0000250 197..203 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..283 21/94 (22%)
Blue background indicates that the domain is not in the aligned region.

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