DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NK7.1 and Hmx2

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001099773.1 Gene:Hmx2 / 293538 RGDID:1565366 Length:273 Species:Rattus norvegicus


Alignment Length:274 Identity:77/274 - (28%)
Similarity:112/274 - (40%) Gaps:84/274 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 GPAKSPNSILKPYQEQQPIRSSSISMSDASEEESAAVAGATSAATAAAAVAATITAATVATPLDQ 281
            ||:::|..     ....|.|..|:|:|  ||||.........|                      
  Rat    29 GPSEAPRE-----PAGWPARKRSLSVS--SEEEEPEEGWKAPA---------------------- 64

  Fly   282 PLNLCVV------KKSRDSNNSPMPATKQSQILGKSATKKESSGK-PAAKKKKLSSTVALPPDIS 339
                |..      |:....::.|:|    ...||   |.|.|.|. |||.::        .|.:|
  Rat    65 ----CYCPDPHGPKEPSPKHHPPIP----FPCLG---TPKGSGGAGPAASER--------TPFLS 110

  Fly   340 PTGSSDSLMRDKLMANNSSSPG----SNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTF 400
            |:.......:::|:...|.|||    .:..|:.|:.|                   .|||.||.|
  Rat   111 PSHPDFKEEKERLLPAGSPSPGPERPRDGGAERQAGA-------------------AKKKTRTVF 156

  Fly   401 TGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSS 465
            :..|:::||..|:.|:|||:|||..:|..|.:||||||.||||||.|||:|      .:||.:::
  Rat   157 SRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQ------LSAELEAA 215

  Fly   466 NAKPGATGTATTTP 479
            |....:..|....|
  Rat   216 NMAHASAQTLVGMP 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 32/55 (58%)
Hmx2NP_001099773.1 Homeodomain 150..206 CDD:459649 32/55 (58%)

Return to query results.
Submit another query.