DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NK7.1 and tlx3b

DIOPT Version :9

Sequence 1:NP_001247103.1 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_739572.1 Gene:tlx3b / 266965 ZFINID:ZDB-GENE-021021-1 Length:300 Species:Danio rerio


Alignment Length:286 Identity:70/286 - (24%)
Similarity:115/286 - (40%) Gaps:78/286 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 QGPAKSPNSILKPYQ--EQQPI----------------RSSSISMSDASEEESAAVAGATSAATA 262
            :.|:.||:...:..|  :.:||                ::|:.:.|::|...|:|..|.....:.
Zfish     3 RAPSSSPSGTSQTSQPTQHEPISFGIDQILSGTDQESQQNSTRNSSESSSGSSSASGGCYHLGSP 67

  Fly   263 AAAVAATITAAT-----VATPLDQPLNLCVVKKSRDSNNSPMPATKQSQILGKSATKKESSGKPA 322
            ..|.|...|..|     :|.|.::              :||...   :..|......:..:.:|.
Zfish    68 TGASATPYTTLTGTFHGIAAPYEE--------------SSPYGV---NLTLAPGGVIRVPAHRPL 115

  Fly   323 AKKKKLSSTVALPPDISPT------------GSSDSLMRDKLMANNSSSPGSNVNAQMQSNANST 375
            |        .|:||.::..            .||....:|:..|  :.:|.:..........|.|
Zfish   116 A--------AAVPPPMASAVPGLGSLSFPWMESSQRFAKDRFAA--ALTPFTVARRIGHPYQNRT 170

  Fly   376 LETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIW 440
                          ..::||.||:|:..||.||||.|..:|||:::||..:||.|.:|:.|||.|
Zfish   171 --------------PPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKTLKMTDAQVKTW 221

  Fly   441 FQNRRTKWKKQDNVTNNEAAEHKSSN 466
            ||||||||::|  ......||.:.:|
Zfish   222 FQNRRTKWRRQ--TAEEREAERQQAN 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_001247103.1 Homeobox 397..449 CDD:278475 30/51 (59%)
tlx3bNP_739572.1 Homeobox 177..230 CDD:278475 30/52 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.