DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Gbx1

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001258382.1 Gene:Gbx1 / 246149 RGDID:621864 Length:425 Species:Rattus norvegicus


Alignment Length:425 Identity:109/425 - (25%)
Similarity:158/425 - (37%) Gaps:102/425 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 SPPTTFLQKQLEAVVAPRPSSVHPQHQQPQQQTVQLQQQRRSVSTPAITTTP------------- 172
            |||...|........||.|....|   .|::......:....||.|.....|             
  Rat     9 SPPARPLPPYERGSAAPEPHCAEP---APRRYLGPRARSEPCVSAPGARRGPGSAMQRAAGGGAP 70

  Fly   173 --------GPPTNWHAHVYDRLPPHPTPHSIADIL--GMSFVKKERPEVAFDAQGPAKSPNSILK 227
                    ||.|   |...|.|...|.|.| ..:|  |.......||.|...|..||..|.. |.
  Rat    71 GGSGGSGGGPGT---AFSIDSLIGPPPPRS-GHLLYTGYPMFMPYRPLVLPQALAPAPLPAG-LP 130

  Fly   228 PYQEQQPIRS------------------SSISMSDA----SEEESAAVAGATSAATAAAAVAATI 270
            |.   .|:.|                  |.::::.|    :|...|.......||.||||.|:|:
  Rat   131 PL---APLASFAGRLSNTFCAGLGQAVPSMVALTTALPSFAEPPDAYYGPPELAAAAAAAAASTV 192

  Fly   271 TAATVATP---LDQPLNLCVVKKSRDS-NNSPMPATKQSQILGKSATKKESSGKP-AAKKKKLSS 330
            :.:....|   .|..|:...:..:|:. ...|.|.........::.....:.||. ::.::||. 
  Rat   193 SRSNPEPPARRTDGALDADELLPAREKVTEPPPPPPPPPPHFSETFPSLPAEGKVYSSDEEKLE- 256

  Fly   331 TVALPPDISPTGS--------SDSLMRDKLMANNSSSPGS--NVNAQMQSNANSTLETTEDDSDS 385
                ||...|.||        .||  .|..:.:::..||:  ....:::.:..:..|.....:..
  Rat   257 ----PPAGEPAGSEPEEEGSGGDS--EDSFLDSSAGGPGALLGPKPKLKGSLGTGAEEGTPVATG 315

  Fly   386 GSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWK- 449
            .:|...:.::.||.||..|:.||||.|..|||||.:||:::|..|.::|.||||||||||.||| 
  Rat   316 VTTPGGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR 380

  Fly   450 -KQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEP 483
             |..||::.                      ||||
  Rat   381 IKAGNVSSR----------------------SGEP 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 33/57 (58%)
Gbx1NP_001258382.1 Homeodomain 324..380 CDD:459649 32/55 (58%)

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