DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NK7.1 and Gbx1

DIOPT Version :9

Sequence 1:NP_001247103.1 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_056554.1 Gene:Gbx1 / 231044 MGIID:95667 Length:418 Species:Mus musculus


Alignment Length:425 Identity:107/425 - (25%)
Similarity:159/425 - (37%) Gaps:109/425 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 SPPTTFLQKQLEAVVAPRPSSVHP---QHQQPQQQTVQLQQQRRSVSTPAIT------------- 169
            :||...|........||.|....|   :|..|:.::......|.:...|...             
Mouse     9 NPPARPLPPYERESAAPEPHCAEPAPRRHLGPRARSEPCVSARGARRGPGSAMQRAAGGGAPGGS 73

  Fly   170 --TTPGPPTNWHAHVYDRLPPHPTPHSIADIL--GMSFVKKERPEVAFDAQGPAKSPNSILKPYQ 230
              ::.||..   |...|.|...|.|.| ..:|  |.......||.|...|..||..|.. |.|. 
Mouse    74 GGSSGGPGA---AFSIDSLIGPPPPRS-GHLLYTGYPMFMPYRPLVLPQALAPAPLPAG-LPPL- 132

  Fly   231 EQQPIRSSSISMSDASEEESAAVAGATSAATAAAAVAATITAATVATPLDQ---PLNLCVVKKSR 292
              .|:.|.:..:|      :...||...|  ..:.||.|....:.|.|.|.   |..|.....|.
Mouse   133 --APLASFAGRLS------NTFCAGLGQA--VPSMVALTTALPSFAEPPDAYYGPPELAAAAAST 187

  Fly   293 DSNNSPMPATKQS-------QILGKSATKKESSGKP--------------------AAKKKKLSS 330
            .|.::|.||.:::       ::|  .|.:|.:...|                    ::.::||. 
Mouse   188 ASRSNPEPAARRTDGALDAEELL--PAREKVTEPPPPPPPHFSETFPSLPAEGKVYSSDEEKLE- 249

  Fly   331 TVALPPDISPTGS--------SDSLMRDKLMANNSSSPGS--NVNAQMQSNANSTLETTEDDSDS 385
                ||...|.||        .||  .|..:.:::..||:  ....:::.:..:..|.....:..
Mouse   250 ----PPAGDPAGSEQEEEGSGGDS--EDSFLDSSAGGPGALLGPKPKLKGSPGTGAEEGTPVATG 308

  Fly   386 GSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWK- 449
            .:|...:.::.||.||..|:.||||.|..|||||.:||:::|..|.::|.||||||||||.||| 
Mouse   309 VTTPGGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR 373

  Fly   450 -KQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEP 483
             |..||::.                      ||||
Mouse   374 IKAGNVSSR----------------------SGEP 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_001247103.1 Homeobox 397..449 CDD:278475 31/51 (61%)
Gbx1NP_056554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90 15/83 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..320 16/112 (14%)
Homeobox 319..372 CDD:278475 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.