DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Msx1

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_034965.2 Gene:Msx1 / 17701 MGIID:97168 Length:303 Species:Mus musculus


Alignment Length:297 Identity:79/297 - (26%)
Similarity:115/297 - (38%) Gaps:45/297 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 SSISMSDASEEESAAVAGATSAATAAAAVAATITA-------ATVATPLD-QPLN---LCVVKKS 291
            :|:.:....|:.:.|.........|..|.|||.||       |....|.. .|.:   |....:.
Mouse     8 TSLPLGVKVEDSAFAKPAGGGVGQAPGAAAATATAMGTDEEGAKPKVPASLLPFSVEALMADHRK 72

  Fly   292 RDSNNSPMPATKQSQILGKS----ATKKESSGKPAAKKK-------KLSSTVALPPD-ISPTGSS 344
            ..:..|.:.|::.:|..|.|    .|:..|.|.|.|...       .:...:.||.| :....|.
Mouse    73 PGAKESVLVASEGAQAAGGSVQHLGTRPGSLGAPDAPSSPRPLGHFSVGGLLKLPEDALVKAESP 137

  Fly   345 DSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELE 409
            :.|.|...|.:...||..   |:..|....||.           ..:..:|.||.||..|:..||
Mouse   138 EKLDRTPWMQSPRFSPPP---ARRLSPPACTLR-----------KHKTNRKPRTPFTTAQLLALE 188

  Fly   410 KMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGT 474
            :.|..|:|||.:||.|.:..|.:|||||||||||||.|.|:.......:..........|.|.| 
Mouse   189 RKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAAFG- 252

  Fly   475 ATTTPSGEPTDKRSS------NATSPTVGNAATIAEI 505
             .:.|.|.|....::      :|:.|....|..:|.:
Mouse   253 -LSFPLGGPAAVAAAAGASLYSASGPFQRAALPVAPV 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 31/55 (56%)
Msx1NP_034965.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..53 9/30 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..112 7/21 (33%)
PTZ00449 <99..>248 CDD:185628 49/162 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..163 8/30 (27%)
Homeodomain 173..229 CDD:459649 31/55 (56%)

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