DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Hoxd9

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_038583.1 Gene:Hoxd9 / 15438 MGIID:96210 Length:339 Species:Mus musculus


Alignment Length:321 Identity:85/321 - (26%)
Similarity:114/321 - (35%) Gaps:64/321 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 PGPPTNWH-AHVYDRLPPHPTPHSIADILGMSFVKK----ERPEVAFDAQGPAKSPNS-ILKPYQ 230
            |||.|... |.|.|. |...|    |:....||..|    .....|..||.||.:..| :..||.
Mouse    31 PGPGTQGRPAGVADG-PAAAT----AEFASCSFAPKSSVFSASWSAVAAQPPAAATMSGLYHPYV 90

  Fly   231 EQQPIRSSSISMSDASEEE------SAAVAGATSAATAAAAVAATITAATVATPLDQPLNLCVVK 289
            ...|:.::.......|..|      ..|..|..|.......      ...|.:| ..|.|.....
Mouse    91 SPPPLAAAEPGRYVRSWMEPLPGFPGGAGGGGGSGGGGGGG------PGPVPSP-GGPANGRHYG 148

  Fly   290 KSRDSNNSPMPATKQSQILGKSATKKESSGK----PAAKKKKLSSTVALPPDISPTGSSDSLMRD 350
            ...::..:|.||...:.  ..|:|...||.|    .||::.:.|.        .|....:|.:||
Mouse   149 IKPETGAAPAPAAASTS--SSSSTSSSSSSKRTECSAARESQGSG--------GPEFPCNSFLRD 203

  Fly   351 KLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGST--------------------------D 389
            |..|...:.||..:.....:..:|......|....|.:                          .
Mouse   204 KAAAATGNGPGVGIGTGPGAVGSSEPSACSDHPSPGCSLKEEEKQPPQPPQQQLDPNNPAANWIH 268

  Fly   390 ARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKK 450
            ||..:|.|..:|..|..||||.|....||:...|.|:|::|.:||.||||||||||.|.||
Mouse   269 ARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 28/55 (51%)
Hoxd9NP_038583.1 Hox9_act 1..>153 CDD:461369 31/133 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..198 19/100 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..263 5/51 (10%)
Homeodomain 273..324 CDD:459649 25/50 (50%)

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