DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Hoxd11

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_032299.1 Gene:Hoxd11 / 15431 MGIID:96203 Length:336 Species:Mus musculus


Alignment Length:293 Identity:66/293 - (22%)
Similarity:94/293 - (32%) Gaps:95/293 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 DRLPPHPTPHSIADILGMSFVKKERPEVAFDAQGPAKSPNSILKPYQEQQPIRSSSISMSDASEE 248
            |.|||                ...||:|.|.|..|                              
Mouse   126 DLLPP----------------AGRRPDVLFKAPEP------------------------------ 144

  Fly   249 ESAAVAGATSAATAAAAVAATITAAT-----VATPLDQPLNLCVVKKSRDSNNSPMPATKQSQIL 308
                |.||.......||.|:...:|.     :....||................|.||..|.:..
Mouse   145 ----VCGAPGPPHGPAAAASNFYSAVGRNGILPQGFDQFYEAAPGPPFAGPQPQPAPAPPQPEGA 205

  Fly   309 GKSATKKESS----GKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQ 369
            ......|..:    |.|.||         ..|...|.|:::.      .......|.....|:  
Mouse   206 ADKGDPKPGAGGGGGSPCAK---------ATPGPEPKGAAEG------GGGEGEGPPGEAGAE-- 253

  Fly   370 SNANSTLETTEDDSDSGSTDA-RRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVT 433
                          .||.|.| :|.:|.|..:|..||.|||:.|....|::..:|.:::::|.:|
Mouse   254 --------------KSGGTVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLT 304

  Fly   434 ETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSN 466
            :.||||||||||.|.||    .|.:..::.:.|
Mouse   305 DRQVKIWFQNRRMKEKK----LNRDRLQYFTGN 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 24/55 (44%)
Hoxd11NP_032299.1 DUF3528 26..187 CDD:432284 19/110 (17%)
Homeodomain 265..321 CDD:459649 24/55 (44%)

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