DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Hoxd1

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_034597.2 Gene:Hoxd1 / 15429 MGIID:96201 Length:328 Species:Mus musculus


Alignment Length:360 Identity:87/360 - (24%)
Similarity:123/360 - (34%) Gaps:119/360 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 TPGPPTNWHAHVYDRLPPHPTPHSIADILGMSFVKKERP----EVAFDAQGPA-KSPNSILKPYQ 230
            ||.||.   ......:|....|......|..::.:...|    |..|...||| ..|.       
Mouse    65 TPSPPA---GPAQSPVPQPAAPRYAPCTLEGAYERGAAPASAAEYGFLGSGPAFDFPG------- 119

  Fly   231 EQQPIRSSSISMSDASEEESAAVAGATSAATAAAA---VAATITAATVATPLDQPLNLCVVKKSR 292
                      ::..|::|..|.|..||||..:...   ::..:..|....|              
Mouse   120 ----------ALGRAADEGGAHVHYATSAVFSGGGSFLLSGQVDFAAFGEP-------------- 160

  Fly   293 DSNNSPMPATKQSQILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNS 357
                .|.||          ..|:.:.|.|...:....:..|.|...|||.|        |.|.:|
Mouse   161 ----GPFPA----------CLKEPADGHPGPFQTVSPAPGACPKPASPTSS--------LPAAHS 203

  Fly   358 SSPGSNV--NAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSA 420
            :.....|  ||..:|..          |:.|:|..  ....||.|:.:|:.||||.|...|||:.
Mouse   204 TFEWMKVKRNAPKKSKL----------SEYGATSP--PSAIRTNFSTKQLTELEKEFHFNKYLTR 256

  Fly   421 SERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPTD 485
            :.|.|:|..|.:.:|||||||||||.|.||::               :.|...|           
Mouse   257 ARRIEIANCLQLNDTQVKIWFQNRRMKQKKRE---------------REGLLAT----------- 295

  Fly   486 KRSSNATSPTVGNAATIAEIK--KSPKSPNRGSNN 518
                         ||::|.||  :|..||.:...|
Mouse   296 -------------AASVASIKLPRSETSPIKSGRN 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 28/55 (51%)
Hoxd1NP_034597.2 PRK12323 <11..217 CDD:481241 42/207 (20%)
Antp-type hexapeptide 204..209 0/4 (0%)
Homeodomain 233..286 CDD:459649 28/52 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..328 4/14 (29%)

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