DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Hoxc9

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_032298.1 Gene:Hoxc9 / 15427 MGIID:96199 Length:260 Species:Mus musculus


Alignment Length:269 Identity:74/269 - (27%)
Similarity:102/269 - (37%) Gaps:69/269 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 MSDASEEESAAVAGATSAATAAAAVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMPATKQSQ 306
            :|..:|:..|:...||.|..|||..:..:...:     |.| :.....|....:.|..|...||.
Mouse    16 ISHDNEDLLASRFPATGAHPAAARPSGLVPDCS-----DFP-SCSFAPKPAVFSTSWAPVPSQSS 74

  Fly   307 I----------LGKSATKKESSGKPAAKKKKLSSTVALP------------PDISP-----TGSS 344
            :          ||.......:..:|      ||..|:.|            ||..|     .|..
Mouse    75 VVYHPYGPQPHLGADTRYMRTWLEP------LSGAVSFPSFPAGGRHYALKPDAYPGRRADCGPG 133

  Fly   345 DSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGS------------------TDAR 391
            |.......|   ..|||     :::..|..||.:.|.|:.:||                  ..||
Mouse   134 DGRSYPDYM---YGSPG-----ELRDRAPQTLPSPEADALAGSKHKEEKADLDPSNPVANWIHAR 190

  Fly   392 RKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTN 456
            ..:|.|..:|..|..||||.|....||:...|.|:|::|.:||.||||||||||.|.||.    |
Mouse   191 STRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKM----N 251

  Fly   457 NEAAEHKSS 465
            .|..:.:.|
Mouse   252 KEKTDKEQS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 28/55 (51%)
Hoxc9NP_032298.1 Hox9_act 1..179 CDD:461369 39/182 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..182 16/69 (23%)
Homeodomain 193..241 CDD:459649 22/47 (47%)

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