DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Hoxc5

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_783857.1 Gene:Hoxc5 / 15424 MGIID:96196 Length:222 Species:Mus musculus


Alignment Length:192 Identity:55/192 - (28%)
Similarity:78/192 - (40%) Gaps:50/192 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 PMPATKQS-QILGKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPG 361
            |.||...| ..:..:|..:....:||.      |..|.|        ..:|.||:....|   ||
Mouse    50 PPPAPSNSLHGVDMAANPRAHPDRPAC------SAAAAP--------GHALGRDEAAPLN---PG 97

  Fly   362 ----SNVNAQMQSNANSTLETTEDDSDSG-------------------------STDARRKKKAR 397
                ......::..|.|:.|..|:.:.:|                         .||.   |::|
Mouse    98 MYSQKAARPALEERAKSSGEIKEEQAQTGQPAGLSQPPAPPQIYPWMTKLHMSHETDG---KRSR 159

  Fly   398 TTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEA 459
            |::|..|..||||.|...:||:...|.|:|..|.:.|.|:||||||||.||||...:.:.||
Mouse   160 TSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSKEA 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 28/55 (51%)
Hoxc5NP_783857.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..141 16/89 (18%)
Antp-type hexapeptide 140..145 0/4 (0%)
Homeodomain 156..212 CDD:459649 28/55 (51%)

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