DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and Hoxc11

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001020013.1 Gene:Hoxc11 / 109663 MGIID:96193 Length:304 Species:Mus musculus


Alignment Length:272 Identity:63/272 - (23%)
Similarity:110/272 - (40%) Gaps:64/272 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 AFDAQGPAKSPNSILKPYQEQ-QPIRSSSISMSDASE-----EESAAVAGATSAATAAAAVAATI 270
            :|..|.|::   .|..||..| .|:|..|..:..:.:     ..|:..|.|...........:|:
Mouse    49 SFLPQAPSR---QISYPYSAQVPPVREVSYGLEPSGKWHHRNSYSSCYAAADELMHRECLPPSTV 110

  Fly   271 TAATV------------ATPLDQPLNLCVVKKSRDSNNSPMPATKQSQIL-----------GKSA 312
            |...:            :.|...|...    .|..:.||.:|     |..           |.:.
Mouse   111 TEILMKNEGSYGGHHHPSAPHAAPAGF----YSSVNKNSVLP-----QAFDRFFDNAYCGGGDAP 166

  Fly   313 TKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQ----SNAN 373
            .:...|||..||.:         |:..|...         :|:.:.: |:...|:.:    |::.
Mouse   167 AEPPCSGKGEAKGE---------PEAPPASG---------LASRAEA-GAEAEAEEENTNPSSSG 212

  Fly   374 STLETTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVK 438
            |:...|::.:...:.:|.|.:|.|..::..||.|||:.|....|::..:|.:::::|.:|:.|||
Mouse   213 SSHSATKEPAKGAAPNAPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVK 277

  Fly   439 IWFQNRRTKWKK 450
            |||||||.|.||
Mouse   278 IWFQNRRMKEKK 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 23/55 (42%)
Hoxc11NP_001020013.1 DUF3528 42..161 CDD:432284 22/123 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..237 16/88 (18%)
Homeodomain 233..289 CDD:459649 23/55 (42%)

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