DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and hoxc10

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001258236.1 Gene:hoxc10 / 100487723 XenbaseID:XB-GENE-486915 Length:351 Species:Xenopus tropicalis


Alignment Length:309 Identity:77/309 - (24%)
Similarity:119/309 - (38%) Gaps:85/309 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 DAQGPAKSPN----------SILKP---YQEQQPI--RSSSISMSDASEEESAAVAGATSAATAA 263
            |...|..|.|          |..:|   |:.:||:  :.||.|.....:||:.....:|......
 Frog    59 DVNNPGLSLNTYPSYLSQLDSWCEPKNTYRIEQPVARQLSSCSFPTNVKEENVCCMYSTDKRAKN 123

  Fly   264 AAVAATITAATVATPLDQPLNLCVVKKSRDSNNS-PMPA-------------------------- 301
            |..||..       |...|       ::|.|::. |:|:                          
 Frog   124 ATEAALY-------PNQMP-------ETRSSDHEVPVPSYYRASQGYSMEKTPSCHTTGDFETTF 174

  Fly   302 ------TKQSQIL------GKSATKKESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKL-M 353
                  :.:|:||      ||....:.:.....:....|:::.|...||.   :..||...|| .
 Frog   175 ENRTSVSARSEILEQQQAGGKGGFPENTKTDNQSLATNLTTSSATASDIK---TEKSLPAPKLPP 236

  Fly   354 ANNSSSPGSNVNAQMQSNANSTLETTED---DSDSGS-TDARRKKKARTTFTGRQIFELEKMFEN 414
            :.....|..|.:.   |..||..|..||   ::.:|: ..|:..:|.|..:|..|..||||.|..
 Frog   237 SEGDKEPSKNTDT---STDNSDAEAKEDIKAENAAGNWLTAKSGRKKRCPYTKHQTLELEKEFLF 298

  Fly   415 KKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQD------NVTNN 457
            ..||:...|.|::|.:.:|:.||||||||||.|.||.:      .:|:|
 Frog   299 NMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRENRIRELTSN 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 26/55 (47%)
hoxc10NP_001258236.1 Homeodomain 278..334 CDD:459649 26/55 (47%)

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