DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and nkx3-3

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_002937227.1 Gene:nkx3-3 / 100485176 XenbaseID:XB-GENE-479908 Length:241 Species:Xenopus tropicalis


Alignment Length:142 Identity:46/142 - (32%)
Similarity:70/142 - (49%) Gaps:32/142 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 GSSDSLMRDKLMANNSSSPGSNVNAQ------MQSNANSTLETTEDDSDSGSTDA---------- 390
            |:.|:..:.|.....||:|..:.:|:      ...|...|.|..:.|:|||:.|:          
 Frog    34 GNGDNTGKAKRTDEKSSTPPHSPSAEGHNDWPQADNPPLTPEKEKTDTDSGTEDSTWEPEAASTG 98

  Fly   391 ----------------RRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKI 439
                            ..||::|..|:..|::|||:.|..::|||..||.::|..|.:|||||||
 Frog    99 AYTDPSSGDLLGDSPKSSKKRSRAAFSHAQVYELERRFSLQRYLSGPERADLAAALKLTETQVKI 163

  Fly   440 WFQNRRTKWKKQ 451
            ||||||.|.|::
 Frog   164 WFQNRRYKTKRK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 29/55 (53%)
nkx3-3XP_002937227.1 Homeodomain 118..174 CDD:459649 29/55 (53%)

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