DRSC/TRiP Functional Genomics Resources

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Protein Alignment NK7.1 and hoxb5

DIOPT Version :10

Sequence 1:NP_650357.2 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001094494.1 Gene:hoxb5 / 100113366 XenbaseID:XB-GENE-1005991 Length:258 Species:Xenopus tropicalis


Alignment Length:230 Identity:67/230 - (29%)
Similarity:96/230 - (41%) Gaps:31/230 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 SAAVAGATSAATAAAAVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMPATKQSQILGKSATK 314
            |.|.|.::....:|.....:...|..:.||..|..|...|..:|..:...|||.    .|.||..
 Frog    60 SRAAASSSHYGDSAFPGQESRFRANQSCPLATPDPLPCAKSHKDELSPTDPATS----AGSSAQF 120

  Fly   315 KESSGKPAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETT 379
            .|.....|:.:.:.|||   |...:|..:          ...:||||:.............:...
 Frog   121 TEVEETSASSETEESST---PRSSAPPRA----------LQENSSPGAAGTDGQNPQIFPWMRKL 172

  Fly   380 EDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNR 444
            ..:.|....|.   |:|||.:|..|..||||.|...:||:...|.|:|..|.::|.|:|||||||
 Frog   173 HINHDMTGPDG---KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNR 234

  Fly   445 RTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTP 479
            |.||||.:.:        ||.:.   |||::...|
 Frog   235 RMKWKKDNKL--------KSMSL---ATGSSAFQP 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NK7.1NP_650357.2 Homeodomain 394..450 CDD:459649 29/55 (53%)
hoxb5NP_001094494.1 Homeodomain 184..240 CDD:459649 29/55 (53%)

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