Protein Alignment spn-B and recA

DIOPT Version :10

• Sequence 1: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_417179.1
• Gene: recA / 947170
• ECOCYCID: EG10823
• Length: 353
• Species: Escherichia coli
• Alignment Length: 274
• Identity: 63/274 - (22%)
• Similarity: 103/274 - (37%)
• Gaps: 83/274 - (30%)

  Fly    88 VSFGCSALDRCTGGGVVTRG-ITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYICTESS 151
            :|.|..:||...|.|.:..| |.|:.|....|||.|.||:....|  ||    ||..|:|..|.:
E. coli    41 ISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQ--RE----GKTCAFIDAEHA 99

  Fly   152 FP---ARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEP------LLACVINRIPRLMQQHGI 207
            ..   ||:|                    .:.::|.:.::|      |..|     ..|.:...:
E. coli   100 LDPIYARKL--------------------GVDIDNLLCSQPDTGEQALEIC-----DALARSGAV 139

  Fly   208 GLIIIDSVAAIF-------RLYNDYLERA-----RHMRRLADALLSYADKYNCAVVCVNQVATR- 259
            .:|::|||||:.       .:.:.::..|     :.||:||..|    .:.|..::.:||:..:
E. coli   140 DVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNL----KQSNTLLIFINQIRMKI 200

  Fly   260 ---DGQDEIPCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPET-----------P 310
               .|..|....|.........||.:.|:.          .|::.|.:...||           |
E. coli   201 GVMFGNPETTTGGNALKFYASVRLDIRRIG----------AVKEGENVVGSETRVKVVKNKIAAP 255

  Fly   311 NDFAEF-LITAEGV 323
            ...||| ::..||:
E. coli   256 FKQAEFQILYGEGI 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-B	NP_476740.1	XRCC3	95..311	CDD:410899	55/252 (22%)
recA	NP_417179.1	recA	1..348	CDD:236476	63/274 (23%)