Protein Alignment spn-B and DMC1

DIOPT Version :9

• Sequence 1: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_011106.1
• Gene: DMC1 / 856926
• SGDID: S000000981
• Length: 334
• Species: Saccharomyces cerevisiae
• Alignment Length: 295
• Identity: 91/295 - (30%)
• Similarity: 141/295 - (47%)
• Gaps: 52/295 - (17%)

  Fly    55 VRVLKDAAAK--WLAEMPQSADSLFKPLVNVRWSRV---SFGCSALDRCTGGGVVTRGITELCGA 114
            |..:|:||.|  .:..:|.:..      :::| .||   |.|...||...|||::|..|||:.|.
Yeast    65 VEKIKEAAGKIIQVGFIPATVQ------LDIR-QRVYSLSTGSKQLDSILGGGIMTMSITEVFGE 122

  Fly   115 AGVGKTQLLLQLSLCVQLPRELGGLGKG-VAYICTESSFPARRLLQMSKACEKRHPEMELNFLGN 178
            ...||||:...|.:..|||||:|| |:| ||||.||.:|...|:.|:::..| ..||   :.|.|
Yeast   123 FRCGKTQMSHTLCVTTQLPREMGG-GEGKVAYIDTEGTFRPERIKQIAEGYE-LDPE---SCLAN 182

  Fly   179 IFVENHIEAEPLLACVINRIPRLMQQHGIGLIIIDSVAAIFRLYNDYL------ERARHMRRLAD 237
            :.....:.:|..:. ::.::...:......||::||:.|.||:  ||.      ||.:.:.:...
Yeast   183 VSYARALNSEHQME-LVEQLGEELSSGDYRLIVVDSIMANFRV--DYCGRGELSERQQKLNQHLF 244

  Fly   238 ALLSYADKYNCAVVCVNQV----------ATRDGQDEIPCLGLQWAHLGRTR--LRVSRVPKQHR 290
            .|...|:::|.||...|||          |:.||:.  |..|...||...||  ||..|
Yeast   245 KLNRLAEEFNVAVFLTNQVQSDPGASALFASADGRK--PIGGHVLAHASATRILLRKGR------ 301

  Fly   291 MGDQLITVRKLEILYSPETPNDFAEFLITAEGVVN 325
             ||:  .|.||:  .||:.|.....::|..:|:.:
Yeast   302 -GDE--RVAKLQ--DSPDMPEKECVYVIGEKGITD 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-B	NP_476740.1	Rad51	87..323	CDD:285604	83/257 (32%)
		Rad51_DMC1_radA	88..324	CDD:238543	83/257 (32%)
DMC1	NP_011106.1	recomb_DMC1	19..332	CDD:131292	91/295 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810